Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.1e-98 363.2 179 100.0
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 3.8e-30 135.6 171 49.1
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.5e-29 133.7 188 44.7
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 4.7e-28 128.6 149 49.7
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.0e-27 127.5 140 46.4
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.0e-27 127.5 160 46.9
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.4e-27 127.1 175 44.6
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 3.0e-27 125.9 192 46.9
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 5.2e-27 125.2 172 45.9
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 6.7e-27 124.8 188 45.7
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 6.7e-27 124.8 167 47.3
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 6.7e-27 124.8 166 45.2
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 8.8e-27 124.4 175 45.7
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 8.8e-27 124.4 140 47.1
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 8.8e-27 124.4 172 48.3
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 2.0e-26 123.2 140 46.4
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.6e-26 122.9 173 46.2
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 3.3e-26 122.5 164 46.3
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.7e-26 121.7 173 45.1
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 9.7e-26 120.9 168 46.4
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.3e-25 120.6 172 43.6
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.7e-25 120.2 140 51.4
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 2.2e-25 119.8 165 43.0
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 2.8e-25 119.4 172 43.0
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.8e-25 118.6 173 45.7
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 4.8e-25 118.6 185 40.5
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 4.8e-25 118.6 157 45.2
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 8.2e-25 117.9 160 46.9
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 1.1e-24 117.5 140 47.1
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 1.1e-24 117.5 167 41.3
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.4e-24 117.1 157 43.9
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.4e-24 117.1 161 42.2
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.4e-24 117.1 161 42.2
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 1.4e-24 117.1 164 43.3
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.8e-24 116.7 157 43.9
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 2.4e-24 116.3 158 48.7
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 2.4e-24 116.3 199 40.7
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.4e-24 116.3 169 41.4
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.1e-24 115.9 169 45.6
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 4.1e-24 115.5 182 42.3
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 5.3e-24 115.2 142 47.2
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 7.0e-24 114.8 192 40.1
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 7.0e-24 114.8 152 43.4
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 7.0e-24 114.8 171 41.5
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 9.1e-24 114.4 151 43.7
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.2e-23 114.0 199 40.2
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 1.2e-23 114.0 170 43.5
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.6e-23 113.6 156 42.3
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 2.0e-23 113.2 171 40.9
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 2.0e-23 113.2 167 42.5
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 4.5e-23 112.1 157 45.2
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 5.9e-23 111.7 140 42.9
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 7.7e-23 111.3 162 43.8
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.3e-22 110.5 174 43.1
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.3e-22 110.5 177 42.9
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.2e-22 109.8 150 44.7
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.2e-22 109.8 180 42.8
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.9e-22 109.4 165 44.2
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 3.8e-22 109.0 173 42.8
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 3.8e-22 109.0 173 42.8
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 5.0e-22 108.6 174 40.2
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 6.5e-22 108.2 173 41.6
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 6.5e-22 108.2 147 44.2
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.1e-21 107.5 151 43.0
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-21 107.1 174 42.5
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.5e-21 107.1 174 42.5
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.5e-21 107.1 183 41.0
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.5e-21 107.1 177 41.8
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.9e-21 106.7 150 44.0
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.5e-21 106.3 143 44.1
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 2.5e-21 106.3 167 41.3
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 3.2e-21 105.9 171 39.2
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 4.2e-21 105.5 186 39.8
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 4.2e-21 105.5 166 41.6
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 5.5e-21 105.1 171 41.5
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 9.4e-21 104.4 174 37.9
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 9.4e-21 104.4 184 38.6
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 9.4e-21 104.4 137 44.5
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.2e-20 104.0 183 40.4
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.2e-20 104.0 184 40.2
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 2.1e-20 103.2 176 40.9
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.1e-20 103.2 175 42.3
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 2.7e-20 102.8 171 41.5
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 2.7e-20 102.8 145 44.1
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 4.7e-20 102.1 175 38.3
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 4.7e-20 102.1 162 43.2
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 6.1e-20 101.7 149 43.6
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 8.0e-20 101.3 189 37.6
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 8.0e-20 101.3 178 38.2
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.0e-19 100.9 132 43.9
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.0e-19 100.9 168 39.9
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 1.0e-19 100.9 189 37.6
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 1.4e-19 100.5 150 37.3
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.8e-19 100.1 179 39.7
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.3e-19 99.8 138 39.1
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 8.8e-19 97.8 171 38.6
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 2.0e-18 96.7 177 36.7
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 4.4e-18 95.5 183 38.3
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 5.7e-18 95.1 210 35.2
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 5.7e-18 95.1 175 37.1
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 7.5e-18 94.7 189 38.6
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 9.8e-18 94.4 219 33.8
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.3e-17 94.0 187 38.5
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.7e-17 93.6 188 38.3
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 2.2e-17 93.2 150 40.0
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.2e-17 93.2 229 32.8
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 4.8e-17 92.0 225 34.2
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 8.3e-17 91.3 179 35.8
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.1e-16 90.9 91 51.6
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.4e-16 90.5 121 45.5
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 2.4e-16 89.7 132 43.2
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 2.4e-16 89.7 138 39.9
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 4.1e-16 89.0 200 37.0
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 7.0e-16 88.2 149 38.3
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 4.5e-15 85.5 147 36.1
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 2.2e-14 83.2 110 45.5
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 2.2e-14 83.2 110 45.5
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.8e-14 82.4 240 32.1
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.1e-13 80.9 90 48.9
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.9e-13 80.1 125 37.6
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 2.5e-13 79.7 121 36.4
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 3.2e-13 79.3 158 37.3
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 9.4e-13 77.8 215 30.2
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.6e-12 77.0 211 30.8
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 2.1e-12 76.6 139 38.1
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.0e-12 74.7 155 34.8
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 5.2e-11 72.0 118 40.7
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 1.2e-10 70.9 93 41.9
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.5e-10 70.5 120 40.8
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 4.9e-09 65.5 134 37.3
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 1.1e-08 64.3 149 31.5
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 1.8e-08 63.5 161 31.7
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 7.0e-08 61.6 100 42.0
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.5e-07 58.9 163 31.3
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 1.3e-06 57.4 173 30.6


User provided reference genes

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