Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1478 Cannabis sativa HOM05D010918 ORTHO05D010815 4.8e-50 201.1 116 100.0
Thecc.04G045800 Theobroma cacao HOM05D010918 ORTHO05D010815 1.5e-11 73.2 96 47.9
FAN05G3850 Fragaria x ananassa HOM05D010918 ORTHO05D010815 7.5e-11 70.9 111 47.7
Duzib147G1198 Durio zibethinus HOM05D010918 ORTHO05D010815 1.3e-10 70.1 107 43.9
CiPaw.03G003100 Carya illinoinensis HOM05D009379 ORTHO05D010815 1.7e-10 69.7 78 52.6
Cfa007173 Carpinus fangiana HOM05D010918 ORTHO05D010815 2.2e-10 69.3 87 54.0
Cpa.g.sc70.79 Carica papaya HOM05D010918 ORTHO05D010815 2.8e-10 68.9 105 45.7
COL.COLO4_13348 Corchorus olitorius HOM05D010918 ORTHO05D010815 2.8e-10 68.9 106 46.2
RcHm_v2.0_Chr2g0176391 Rosa chinensis HOM05D010918 ORTHO05D010815 7.0e-09 64.3 110 46.4
Haze_14937 Corylus avellana HOM05D000001 ORTHO05D000003 2.0e-08 62.8 75 52.0
Gorai.011G087000 Gossypium raimondii HOM05D010918 ORTHO05D010815 5.9e-08 61.2 77 49.4
Gohir.A10G071200 Gossypium hirsutum HOM05D010918 ORTHO05D010815 1.0e-07 60.5 101 45.5
QL02p069882 Quercus lobata HOM05D010918 ORTHO05D010815 1.3e-07 60.1 102 44.1
FAN14G2957 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.3e-07 59.3 85 44.7
Manes.11G077600 Manihot esculenta HOM05D009379 ORTHO05D010815 2.9e-07 58.9 83 47.0
Manes.04G092250 Manihot esculenta HOM05D009379 ORTHO05D010815 3.8e-07 58.5 102 41.2
Glyma.16G049700 Glycine max HOM05D009379 ORTHO05D010815 5.0e-07 58.2 87 47.1
Gohir.D10G079900 Gossypium hirsutum HOM05D010918 ORTHO05D010815 5.0e-07 58.2 88 47.7
VMungo1383G0128 Vigna mungo HOM05D009379 ORTHO05D010815 5.0e-07 58.2 93 44.1
MD09G1004200 Malus domestica HOM05D010918 ORTHO05D010815 6.6e-07 57.8 89 47.2
Sabra17G0054200 Salix brachista HOM05D001116 ORTHO05D001028 8.6e-07 57.4 106 40.6
TAR371G1162 Trochodendron aralioides HOM05D010918 ORTHO05D010815 1.9e-06 56.2 99 41.4
Potri.017G060400 Populus trichocarpa HOM05D010918 ORTHO05D010815 4.2e-06 55.1 82 47.6
Rhsim10G0001800 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.2e-06 55.1 91 48.4


User provided reference genes

Program Settings