Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 6.3e-116 421.0 247 100.0
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 3.8e-44 182.6 244 48.0
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 6.4e-44 181.8 249 46.6
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.4e-43 180.6 251 45.8
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 2.4e-43 179.9 237 47.3
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 3.5e-42 176.0 247 46.2
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 7.8e-42 174.9 243 43.6
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.0e-41 174.5 247 44.9
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.3e-41 174.1 249 45.8
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 5.1e-41 172.2 247 45.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 8.7e-41 171.4 243 46.5
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 4.3e-40 169.1 245 45.7
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 4.3e-40 169.1 250 44.4
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.3e-39 167.5 246 48.8
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.3e-39 167.5 237 43.5
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.6e-39 167.2 241 44.4
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 2.8e-39 166.4 197 47.2
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.6e-39 166.0 240 44.2
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 3.6e-39 166.0 248 42.3
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 3.6e-39 166.0 248 42.3
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 6.2e-39 165.2 247 43.7
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.4e-38 164.1 248 41.9
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 6.9e-38 161.8 273 41.4
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 9.0e-38 161.4 246 41.5
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 4.4e-37 159.1 179 53.1
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.7e-36 157.1 257 43.2
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.7e-36 157.1 249 43.4
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 2.9e-36 156.4 247 47.4
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 8.4e-36 154.8 205 46.8
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 8.4e-36 154.8 251 43.8
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.1e-35 154.5 249 43.4
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.4e-35 154.1 248 44.4
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 4.2e-35 152.5 236 44.5
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.0e-33 146.4 258 39.5
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 5.1e-33 145.6 251 43.8
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.1e-32 144.4 195 45.1
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.5e-32 144.1 250 42.8
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 4.8e-31 139.0 223 41.7
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.8e-31 139.0 244 39.8
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.1e-30 137.9 244 40.2
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.4e-30 137.5 243 40.7
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.3e-30 135.6 238 38.2
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.7e-28 130.6 195 42.6
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 2.9e-28 129.8 221 41.6
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.5e-27 125.6 250 37.2
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.2e-26 124.4 213 41.3
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 7.9e-26 121.7 242 37.2
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.8e-25 120.6 253 37.2
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 3.9e-25 119.4 236 39.4
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 6.7e-25 118.6 239 37.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 8.7e-25 118.2 242 38.8
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.5e-24 116.7 230 42.6
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 8.1e-23 111.7 186 39.2
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.4e-22 110.9 151 41.7
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-22 110.9 247 42.1
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.4e-22 110.2 186 36.6
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.4e-22 110.2 237 35.0
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.4e-22 110.2 238 33.2
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 3.1e-22 109.8 252 36.1
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 5.3e-22 109.0 205 38.0
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 9.0e-22 108.2 185 41.1
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 2.6e-21 106.7 217 38.7
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 4.5e-21 105.9 118 43.2
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.0e-20 104.8 96 53.1
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.3e-20 104.4 246 35.8
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.9e-20 103.2 118 44.1
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.9e-20 102.4 180 37.8
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 4.9e-20 102.4 118 44.1
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 4.9e-20 102.4 205 36.1
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.4e-20 101.7 199 34.7
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.4e-20 101.7 199 34.7
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 8.4e-20 101.7 203 34.0
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.1e-19 101.3 238 33.2
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.1e-19 101.3 118 42.4
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-19 101.3 211 35.5
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.1e-19 101.3 191 34.6
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.4e-19 100.9 171 35.7
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.4e-19 100.9 171 36.8
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.9e-19 100.5 220 37.3
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 3.2e-19 99.8 238 33.2
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 3.2e-19 99.8 118 41.5
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 5.5e-19 99.0 202 35.1
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 5.5e-19 99.0 150 38.7
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 7.1e-19 98.6 246 35.0
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 9.3e-19 98.2 151 38.4
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.6e-18 97.4 118 41.5
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 3.5e-18 96.3 203 36.0
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.0e-18 95.5 177 36.7
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.3e-17 94.4 203 33.0
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 2.3e-17 93.6 199 36.2
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 5.1e-17 92.4 197 35.5
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 8.7e-17 91.7 203 34.0
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 8.7e-17 91.7 215 36.7
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 8.7e-17 91.7 147 36.7
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 8.7e-17 91.7 244 36.9
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-16 90.9 207 33.3
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 3.3e-16 89.7 216 29.2
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 4.3e-16 89.4 203 34.5
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 7.4e-16 88.6 174 35.1
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.1e-15 87.0 193 30.1
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.4e-14 84.3 186 39.8
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.4e-14 84.3 130 35.4
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 4.1e-14 82.8 65 58.5
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 2.6e-13 80.1 195 32.3
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.4e-13 79.7 91 41.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 4.5e-13 79.3 118 37.3
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 4.5e-13 79.3 118 36.4
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 4.5e-13 79.3 118 37.3
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 4.5e-13 79.3 118 37.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.9e-13 79.0 154 33.1
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 1.0e-12 78.2 129 38.8
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.7e-12 77.4 200 32.0
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 1.4e-11 74.3 197 28.4
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 1.9e-11 73.9 163 35.0
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 2.5e-11 73.6 246 26.8
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 3.2e-11 73.2 179 36.3
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 5.5e-11 72.4 191 36.6
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 1.2e-10 71.2 206 33.5
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 2.7e-10 70.1 199 27.1
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 6.7e-09 65.5 192 30.2
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 8.7e-09 65.1 205 31.7
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.5e-08 63.5 59 54.2
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 3.3e-08 63.2 196 28.6
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 1.6e-07 60.8 234 26.1
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.8e-07 60.1 194 32.0
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 9.0e-06 55.1 201 25.4


User provided reference genes

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