Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1388 Cannabis sativa HOM05D001914 ORTHO05D114040 9.6e-62 240.0 119 100.0
Glyma.02G008100 Glycine max HOM05D001914 ORTHO05D001983 2.7e-08 62.4 37 78.4
Glyma.10G137400 Glycine max HOM05D001914 ORTHO05D001983 2.7e-08 62.4 37 78.4
Lj5g0018975 Lotus japonicus HOM05D001914 ORTHO05D001983 2.7e-08 62.4 37 78.4
THA.LOC104817434 Tarenaya hassleriana HOM05D001914 ORTHO05D001983 3.6e-08 62.0 37 78.4
CANSAT25G3290 Cannabis sativa HOM05D001914 ORTHO05D001983 4.7e-08 61.6 37 78.4
AT2G47010 Arabidopsis thaliana HOM05D001914 ORTHO05D001983 6.1e-08 61.2 37 78.4
Ciclev10019888m.g Citrus clementina HOM05D001914 ORTHO05D001983 6.1e-08 61.2 37 81.1
BcaC02g12828 Brassica carinata HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
A05p00790 Brassica napus HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
C04p00950 Brassica napus HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
BolC4t21733H Brassica oleracea HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
BraA05t19082Z Brassica rapa HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
Thhalv10001420m.g Eutrema salsugineum HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
Phvul.007G209900 Phaseolus vulgaris HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
PGR142G3872 Punica granatum HOM05D001914 ORTHO05D001983 1.0e-07 60.5 38 73.7
Sc05g0000080 Simmondsia chinensis HOM05D001914 ORTHO05D001983 1.0e-07 60.5 37 75.7
TAR636G2233 Trochodendron aralioides HOM05D001914 ORTHO05D007041 1.0e-07 60.5 36 80.6
AL4G46500 Arabidopsis lyrata HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 75.7
Carub.0004s2975 Capsella rubella HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 75.7
CARHR142380 Cardamine hirsuta HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 75.7
Manes.05G009600 Manihot esculenta HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 78.4
Oeu002568.1 Olea europaea HOM05D001914 ORTHO05D001983 1.4e-07 60.1 70 47.1
Psat6g159080 Pisum sativum HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 75.7
Potri.002G187700 Populus trichocarpa HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 78.4
QL12p034545 Quercus lobata HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 78.4
Sabra02G0130000 Salix brachista HOM05D001914 ORTHO05D001983 1.4e-07 60.1 37 78.4
DCAR_002933 Daucus carota HOM05D001914 ORTHO05D001983 1.8e-07 59.7 37 78.4
Lj1C9T4 Lonicera japonica HOM05D001914 ORTHO05D001983 1.8e-07 59.7 37 78.4
VMungo0720G1343 Vigna mungo HOM05D001914 ORTHO05D001983 2.3e-07 59.3 37 75.7
ECA247G1029 Erigeron canadensis HOM05D001914 ORTHO05D001983 3.0e-07 58.9 38 73.7
Eucgr.K00576 Eucalyptus grandis HOM05D001914 ORTHO05D001983 3.0e-07 58.9 37 78.4
Oeu006544.2 Olea europaea HOM05D001914 ORTHO05D001983 3.9e-07 58.5 37 75.7
TAR365G0703 Trochodendron aralioides HOM05D001914 ORTHO05D001983 3.9e-07 58.5 36 77.8
Glyma.04G053500 Glycine max HOM05D001914 ORTHO05D001983 5.1e-07 58.2 76 46.1
HanXRQChr15g0464411 Helianthus annuus HOM05D001914 ORTHO05D001983 5.1e-07 58.2 38 71.1
Os05g0272200 Oryza sativa ssp. japonica HOM05D001914 ORTHO05D001983 5.1e-07 58.2 37 75.7
PSO761G0033 Papaver somniferum HOM05D001914 ORTHO05D001983 5.1e-07 58.2 36 75.0
Hund00925 Selenicereus undatus HOM05D001914 ORTHO05D001983 5.1e-07 58.2 38 71.1
arahy.Tifrunner.gnm1.ann1.873UVH Arachis hypogaea HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 73.0
arahy.Tifrunner.gnm1.ann1.MKLC0K Arachis hypogaea HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 73.0
MSTRG.14256 Avicennia marina HOM05D001914 ORTHO05D001983 6.7e-07 57.8 38 71.1
CSS0012953 Camellia sinensis var. sinensis HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 75.7
CAN.G100.54 Capsicum annuum HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 75.7
Migut.J01321 Erythranthe guttata HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 75.7
Medtr1g086170 Medicago truncatula HOM05D001914 ORTHO05D001983 6.7e-07 57.8 37 73.0
PGR042G1868 Punica granatum HOM05D001914 ORTHO05D001983 6.7e-07 57.8 38 76.3
MBI18_g10384_MAGBIO Magnolia biondii HOM05D001914 ORTHO05D001983 8.8e-07 57.4 38 71.1
Thecc.01G324100 Theobroma cacao HOM05D001914 ORTHO05D001983 8.8e-07 57.4 38 71.1
HPP92_003917 Vanilla planifolia HOM05D001914 ORTHO05D001983 8.8e-07 57.4 37 73.0
EL10As5g23618 Beta vulgaris HOM05D001914 ORTHO05D001983 1.1e-06 57.0 38 71.1
CSS0020979 Camellia sinensis var. sinensis HOM05D001914 ORTHO05D001983 1.1e-06 57.0 38 73.7
CDE02G1128 Ceratophyllum demersum HOM05D001914 ORTHO05D003011 1.1e-06 57.0 36 75.0
Eucgr.A01013 Eucalyptus grandis HOM05D001914 ORTHO05D001983 1.1e-06 57.0 37 73.0
RcHm_v2.0_Chr3g0486001 Rosa chinensis HOM05D001914 ORTHO05D001983 1.1e-06 57.0 38 68.4
TAR362G1329 Trochodendron aralioides HOM05D001914 ORTHO05D001983 1.1e-06 57.0 36 75.0
Ca_10243_v3 Cicer arietinum L. HOM05D001914 ORTHO05D001983 1.5e-06 56.6 37 70.3
COL.COLO4_23140 Corchorus olitorius HOM05D001914 ORTHO05D001983 1.5e-06 56.6 37 73.0
Atru.chr5.878 Acer truncatum HOM05D001914 ORTHO05D001983 2.0e-06 56.2 37 73.0
Aqoxy5G02809 Aquilegia oxysepala HOM05D001914 ORTHO05D001983 2.0e-06 56.2 37 70.3
Cfa004896 Carpinus fangiana HOM05D001914 ORTHO05D001983 2.0e-06 56.2 37 73.0
Lalb_Chr06g0172841 Lupinus albus HOM05D001914 ORTHO05D001983 2.0e-06 56.2 37 70.3
SalBow2G1293 Salvia bowleyana HOM05D001914 ORTHO05D001983 2.0e-06 56.2 37 75.7
ATR0568G091 Amborella trichopoda HOM05D001914 ORTHO05D001983 2.6e-06 55.8 40 67.5
AUR62011694 Chenopodium quinoa HOM05D001914 ORTHO05D001983 2.6e-06 55.8 38 68.4
AUR62024553 Chenopodium quinoa HOM05D001914 ORTHO05D001983 2.6e-06 55.8 38 68.4
Duzib138G1212 Durio zibethinus HOM05D001914 ORTHO05D001983 2.6e-06 55.8 37 73.0
Lsat_1_v5_gn_9_6900 Lactuca sativa HOM05D001914 ORTHO05D001983 2.6e-06 55.8 37 73.0
Os05g0272800 Oryza sativa ssp. japonica HOM05D001914 ORTHO05D001983 2.6e-06 55.8 37 73.0
Rhsim01G0000100 Rhododendron simsii HOM05D001914 ORTHO05D001983 2.6e-06 55.8 38 73.7
TPR.G3032 Trifolium pratense HOM05D001914 ORTHO05D001983 2.6e-06 55.8 37 70.3
arahy.Tifrunner.gnm1.ann1.6ZGG0N Arachis hypogaea HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 70.3
arahy.Tifrunner.gnm1.ann1.7M6195 Arachis hypogaea HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 70.3
MSTRG.15095 Avicennia marina HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 73.0
Duzib133G1047 Durio zibethinus HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 73.0
Gohir.A12G120400 Gossypium hirsutum HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 73.0
Gohir.D12G124300 Gossypium hirsutum HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 73.0
Gorai.N014100 Gossypium raimondii HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 73.0
Nitab4.5_0000222g0350 Nicotiana tabacum HOM05D001914 ORTHO05D001983 3.3e-06 55.5 37 70.3
SalBow7G0904 Salvia bowleyana HOM05D001914 ORTHO05D001983 3.3e-06 55.5 38 68.4
Cc05_g10600 Coffea canephora HOM05D001914 ORTHO05D001983 4.4e-06 55.1 37 73.0
Haze_05134 Corylus avellana HOM05D001914 ORTHO05D001983 4.4e-06 55.1 37 73.0
DCAR_021042 Daucus carota HOM05D001914 ORTHO05D001983 4.4e-06 55.1 38 71.1
Nn6g34371 Nelumbo nucifera HOM05D001914 ORTHO05D001983 4.4e-06 55.1 62 50.0
QL05p050205 Quercus lobata HOM05D001914 ORTHO05D001983 4.4e-06 55.1 37 67.6
GSVIVG01028260001 Vitis vinifera HOM05D001914 ORTHO05D001983 4.4e-06 55.1 37 73.0
CSS0030025 Camellia sinensis var. sinensis HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
CSS0043433 Camellia sinensis var. sinensis HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
CiPaw.07G124700 Carya illinoinensis HOM05D001914 ORTHO05D001983 5.7e-06 54.7 37 70.3
Cc10_g11960 Coffea canephora HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 73.7
FvH4_1g26330 Fragaria vesca HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
FAN19G1954 Fragaria x ananassa HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
FAN26G2781 Fragaria x ananassa HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
FAN28G0214 Fragaria x ananassa HOM05D001914 ORTHO05D001983 5.7e-06 54.7 38 68.4
Nn3g21929 Nelumbo nucifera HOM05D001914 ORTHO05D001983 5.7e-06 54.7 37 70.3
PGSC0003DMG401005194 Solanum tuberosum HOM05D001914 ORTHO05D001983 5.7e-06 54.7 37 70.3
TWI23G0336 Tripterygium wilfordii HOM05D001914 ORTHO05D001983 5.7e-06 54.7 36 72.2
Oeu058450.1 Olea europaea HOM05D001914 ORTHO05D001983 7.4e-06 54.3 37 67.6
Rhsim06G0212500 Rhododendron simsii HOM05D001914 ORTHO05D001983 7.4e-06 54.3 37 70.3
Sp4g29010 Schrenkiella parvula HOM05D001914 ORTHO05D001983 7.4e-06 54.3 37 70.3
CSS0032588 Camellia sinensis var. sinensis HOM05D001914 ORTHO05D001983 9.7e-06 53.9 38 73.7
Ca_27007_v3 Cicer arietinum L. HOM05D001914 ORTHO05D001983 9.7e-06 53.9 37 70.3


User provided reference genes

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