Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1382 Cannabis sativa HOM05D009344 ORTHO05D001269 9.6e-95 350.1 174 100.0
CANSAT78G1294 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-90 336.7 167 100.0
CANSAT21G1675 Cannabis sativa HOM05D009344 ORTHO05D001269 5.1e-88 327.8 167 97.0
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 3.5e-44 182.2 167 55.7
CANSAT25G0604 Cannabis sativa HOM05D008058 ORTHO05D001269 2.5e-42 176.0 88 98.9
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 1.4e-40 170.2 167 52.7
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 3.3e-39 165.6 167 49.7
CANSAT54G1637 Cannabis sativa HOM05D009344 ORTHO05D001269 1.3e-35 153.7 164 48.8
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 1.9e-34 149.8 155 50.3
CANSAT78G1060 Cannabis sativa HOM05D009344 ORTHO05D001269 9.4e-34 147.5 159 50.3
CANSAT01G2042 Cannabis sativa HOM05D009344 ORTHO05D001269 2.7e-33 146.0 165 49.1
CANSAT01G3114 Cannabis sativa HOM05D009344 ORTHO05D001269 2.7e-33 146.0 166 48.2
CANSAT64G1497 Cannabis sativa HOM05D009344 ORTHO05D001269 8.0e-33 144.4 165 49.1
CANSAT92G0002 Cannabis sativa HOM05D009344 ORTHO05D001269 6.8e-32 141.4 164 47.0
CANSAT54G0280 Cannabis sativa HOM05D009344 ORTHO05D001269 5.7e-31 138.3 164 47.0
CANSAT56G2211 Cannabis sativa HOM05D009344 ORTHO05D001269 9.8e-31 137.5 166 46.4
CANSAT25G1815 Cannabis sativa HOM05D009344 ORTHO05D001269 1.8e-29 133.3 125 53.6
CANSAT35G1833 Cannabis sativa HOM05D009344 ORTHO05D001269 4.1e-29 132.1 166 45.2
CANSAT56G3785 Cannabis sativa HOM05D009344 ORTHO05D001269 1.6e-25 120.2 124 52.4
CANSAT80G1205 Cannabis sativa HOM05D009344 ORTHO05D001269 2.8e-25 119.4 137 47.4
CANSAT11G1872 Cannabis sativa HOM05D009344 ORTHO05D001269 6.1e-25 118.2 109 54.1
CANSAT21G0421 Cannabis sativa HOM05D009344 ORTHO05D001269 1.8e-24 116.7 143 46.2
CANSAT35G1946 Cannabis sativa HOM05D009344 ORTHO05D001269 1.7e-22 110.2 131 45.8
CANSAT35G0564 Cannabis sativa HOM05D009344 ORTHO05D001269 2.2e-22 109.8 100 55.0
CANSAT54G2191 Cannabis sativa HOM05D008058 ORTHO05D001269 8.0e-17 91.3 98 57.1
CANSAT54G1186 Cannabis sativa HOM05D008058 ORTHO05D001269 3.4e-15 85.9 98 42.9
CANSAT25G1481 Cannabis sativa HOM05D009344 ORTHO05D001269 2.9e-14 82.8 102 45.1
CANSAT35G0637 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-13 80.9 102 45.1
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-13 80.5 125 37.6
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.4e-13 80.5 125 37.6
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-13 80.5 125 37.6
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-13 79.7 125 37.6
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-13 79.0 125 37.6
TWI74G0172 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-13 79.0 143 35.7
TWI77G0421 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.1e-13 79.0 125 37.6
CANSAT54G2626 Cannabis sativa HOM05D009344 ORTHO05D001269 2.7e-12 76.3 85 48.2
TWI12G0965 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.0e-11 74.3 166 32.5
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 3.9e-11 72.4 164 31.7
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-09 66.6 181 29.8
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 2.8e-09 66.2 30 100.0
Oeu048342.1 Olea europaea HOM05D007816 ORTHO05D000397 3.6e-09 65.9 133 34.6
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 6.2e-09 65.1 174 29.3
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.2e-09 65.1 181 29.3
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.0e-09 64.7 174 29.3
PSO339G3521 Papaver somniferum HOM05D010112 ORTHO05D000397 1.2e-07 60.8 113 34.5
Oeu013150.1 Olea europaea HOM05D007816 ORTHO05D000397 1.5e-07 60.5 133 33.1
Oeu053568.1 Olea europaea HOM05D000700 ORTHO05D000397 2.0e-07 60.1 158 32.3
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.6e-07 59.7 182 29.7
Oeu062339.1 Olea europaea HOM05D000700 ORTHO05D000397 2.6e-07 59.7 159 31.4
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-07 59.7 143 30.8
TWI59G0381 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.6e-07 59.7 174 27.6
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.6e-07 59.7 174 28.2
Oeu018259.1 Olea europaea HOM05D007816 ORTHO05D000397 3.4e-07 59.3 130 33.8
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 3.4e-07 59.3 125 33.6
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 3.4e-07 59.3 125 33.6
Oeu026439.1 Olea europaea HOM05D007816 ORTHO05D000397 4.4e-07 58.9 136 33.1
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 4.4e-07 58.9 136 33.1
Oeu060715.1 Olea europaea HOM05D000700 ORTHO05D000397 4.4e-07 58.9 153 31.4
Oeu062686.1 Olea europaea HOM05D007816 ORTHO05D000397 7.5e-07 58.2 136 32.4
PSO170G4386 Papaver somniferum HOM05D007816 ORTHO05D000397 7.5e-07 58.2 133 31.6
Oeu030748.1 Olea europaea HOM05D000700 ORTHO05D000397 9.8e-07 57.8 89 38.2
Oeu032340.1 Olea europaea HOM05D000700 ORTHO05D000397 9.8e-07 57.8 158 31.6
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 1.3e-06 57.4 125 29.6
SGA_v2.0_scaffold9G04779 Striga asiatica HOM05D008585 ORTHO05D000397 1.3e-06 57.4 139 28.8
Oeu047399.1 Olea europaea HOM05D007816 ORTHO05D000397 1.7e-06 57.0 136 32.4
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 1.7e-06 57.0 139 28.1
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-06 57.0 134 32.1
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 2.2e-06 56.6 128 30.5
PSO151G0135 Papaver somniferum HOM05D010112 ORTHO05D000397 2.2e-06 56.6 128 29.7
Oeu027805.1 Olea europaea HOM05D000700 ORTHO05D000397 2.9e-06 56.2 112 34.8
Oeu060279.1 Olea europaea HOM05D006164 ORTHO05D010236 2.9e-06 56.2 92 39.1
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.7e-06 55.8 164 25.0
PSO339G1629 Papaver somniferum HOM05D010112 ORTHO05D000397 3.7e-06 55.8 113 31.0
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.7e-06 55.8 130 31.5
Oeu031011.1 Olea europaea HOM05D000700 ORTHO05D000397 4.9e-06 55.5 158 31.0
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 6.4e-06 55.1 128 30.5
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 8.3e-06 54.7 128 30.5
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.3e-06 54.7 125 32.0
TWI60G0573 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.3e-06 54.7 82 41.5


User provided reference genes

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