Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.2e-264 916.0 471 100.0
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 7.4e-142 508.1 482 59.1
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.8e-140 503.4 481 59.5
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 2.8e-133 479.6 482 56.6
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 6.3e-133 478.4 477 57.2
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 4.2e-129 465.7 570 48.8
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 7.2e-129 464.9 500 54.0
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 1.2e-126 457.6 472 53.6
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.4e-126 456.1 491 53.6
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 3.5e-123 446.0 468 55.8
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.3e-122 444.1 485 52.4
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.5e-121 440.7 465 54.8
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.4e-119 434.1 479 53.0
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 5.7e-118 428.7 484 51.2
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.9e-117 425.6 473 52.6
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 3.5e-115 419.5 463 52.3
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 3.5e-115 419.5 465 52.3
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.3e-114 417.5 469 49.7
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 6.6e-114 415.2 476 50.2
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 4.3e-113 412.5 479 49.7
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 4.4e-110 402.5 478 50.4
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 3.2e-108 396.4 474 49.8
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 4.1e-108 396.0 481 48.0
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 9.2e-108 394.8 438 52.1
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 3.5e-107 392.9 480 50.0
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 2.5e-105 386.7 487 48.3
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 4.7e-104 382.5 480 47.7
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.5e-102 377.5 483 49.1
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 8.3e-101 371.7 502 45.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 3.2e-100 369.8 519 45.3
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.1e-99 367.1 479 45.9
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.1e-97 361.3 493 44.4
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.9e-97 360.5 429 49.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 2.5e-97 360.1 475 47.6
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 8.1e-96 355.1 487 46.6
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.1e-95 354.8 474 45.8
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.4e-95 354.4 502 45.4
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 5.2e-95 352.4 477 47.0
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.2e-94 351.3 486 45.3
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 3.4e-94 349.7 475 44.2
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.4e-94 349.7 505 44.4
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.4e-94 349.4 470 46.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 7.5e-94 348.6 471 45.2
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.7e-93 347.4 479 44.7
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.4e-92 344.4 482 45.2
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.6e-91 340.9 503 42.1
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.7e-91 340.1 480 43.8
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 3.5e-91 339.7 489 45.2
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 6.0e-91 339.0 478 44.6
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 3.9e-90 336.3 482 46.3
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.5e-89 334.3 396 50.3
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 4.3e-89 332.8 494 44.5
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.2e-88 331.3 490 43.3
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.6e-88 330.9 491 42.8
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.8e-88 330.1 487 43.7
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.4e-87 327.0 440 46.1
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 2.4e-87 327.0 491 42.8
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.8e-86 322.4 451 44.6
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.2e-85 320.5 507 43.0
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.9e-84 317.4 405 50.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 2.7e-83 313.5 594 38.4
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 3.5e-83 313.2 483 41.6
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 4.3e-81 306.2 310 56.1
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 9.6e-81 305.1 480 44.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.3e-80 304.7 466 43.3
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.8e-80 303.5 508 41.3
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 2.4e-79 300.4 334 50.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 5.3e-79 299.3 392 43.4
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 2.6e-78 297.0 414 46.1
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 8.4e-77 292.0 310 53.9
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.3e-72 278.1 303 50.2
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.6e-70 270.4 484 39.3
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 6.4e-69 265.8 430 41.2
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 6.0e-67 259.2 452 38.7
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.3e-66 257.3 493 37.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.1e-64 250.8 463 37.6
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.1e-63 248.4 275 49.1
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.1e-63 246.9 376 40.7
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.5e-62 244.6 341 45.2
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.7e-61 241.1 282 51.1
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 6.2e-56 222.6 289 47.1
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.3e-53 214.9 430 36.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.2e-51 208.4 197 54.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 2.1e-51 207.6 254 50.4
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.4e-44 184.9 559 30.6
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.2e-43 181.8 168 55.4
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.2e-43 181.8 486 31.5
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.4e-42 178.3 203 52.7
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.7e-40 171.4 458 30.8
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 6.1e-35 152.9 141 52.5
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 2.3e-34 151.0 172 46.5
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.3e-29 135.2 193 40.9
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.8e-26 124.8 141 50.4
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.1e-20 105.5 119 49.6
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.4e-18 98.6 85 50.6
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 2.8e-16 90.9 386 25.6
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.2e-14 85.5 70 61.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 9.4e-12 75.9 130 33.1
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 6.8e-10 69.7 205 26.8
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.2e-09 68.9 82 47.6
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.2e-09 68.9 119 35.3
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 5.7e-09 66.6 161 32.3


User provided reference genes

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