Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 9.6e-31 136.3 77 100.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.9e-23 112.1 77 83.1
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 1.9e-23 112.1 77 80.5
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.3e-23 110.9 77 80.5
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 9.6e-23 109.8 77 77.9
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 9.6e-23 109.8 77 77.9
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 9.6e-23 109.8 77 79.2
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 2.1e-22 108.6 77 84.4
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 4.8e-22 107.5 77 83.1
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 8.2e-22 106.7 77 80.5
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 75.3
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 75.3
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 79.2
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 79.2
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 3.1e-21 104.8 77 80.5
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 5.3e-21 104.0 77 74.0
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 5.3e-21 104.0 72 81.9
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 5.3e-21 104.0 75 74.7
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 5.3e-21 104.0 77 75.3
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 9.0e-21 103.2 77 76.6
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 9.0e-21 103.2 64 89.1
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 9.0e-21 103.2 77 77.9
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 1.2e-20 102.8 77 77.9
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.2e-20 102.8 78 75.6
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 1.2e-20 102.8 77 79.2
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 1.5e-20 102.4 77 76.6
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 2.0e-20 102.1 77 74.0
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 2.0e-20 102.1 65 87.7
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.0e-20 102.1 74 81.1
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.0e-20 102.1 74 81.1
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 2.0e-20 102.1 74 81.1
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 2.0e-20 102.1 77 77.9
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.0e-20 102.1 77 77.9
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 2.6e-20 101.7 77 75.3
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 3.4e-20 101.3 77 81.8
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 3.4e-20 101.3 74 73.0
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 4.5e-20 100.9 77 76.6
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 4.5e-20 100.9 75 78.7
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 4.5e-20 100.9 75 78.7
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 5.9e-20 100.5 74 73.0
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 7.6e-20 100.1 77 79.2
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.3e-19 99.4 77 75.3
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 1.3e-19 99.4 64 85.9
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 1.3e-19 99.4 78 76.9
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 1.7e-19 99.0 77 74.0
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.7e-19 99.0 72 73.6
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.7e-19 99.0 77 72.7
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.2e-19 98.6 72 75.0
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 75.3
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 2.2e-19 98.6 64 85.9
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 80.5
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 74.0
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 75.3
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 75.3
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.9e-19 98.2 77 75.3
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 2.9e-19 98.2 77 75.3
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 2.9e-19 98.2 77 75.3
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 3.8e-19 97.8 77 71.4
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 5.0e-19 97.4 77 71.4
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 5.0e-19 97.4 78 70.5
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 6.5e-19 97.1 70 72.9
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 8.5e-19 96.7 75 74.7
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 8.5e-19 96.7 74 77.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 8.5e-19 96.7 77 74.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 8.5e-19 96.7 77 74.0
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 1.1e-18 96.3 74 75.7
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 1.1e-18 96.3 77 72.7
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.9e-18 95.5 75 73.3
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 3.2e-18 94.7 77 72.7
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 4.2e-18 94.4 77 71.4
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 4.2e-18 94.4 77 67.5
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 4.2e-18 94.4 77 67.5
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 4.2e-18 94.4 77 67.5
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 4.2e-18 94.4 72 72.2
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 4.2e-18 94.4 80 75.0
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.2e-18 94.4 80 75.0
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.2e-18 94.4 80 75.0
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.2e-18 94.4 80 75.0
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.2e-18 94.4 75 72.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 5.5e-18 94.0 72 69.4
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 5.5e-18 94.0 77 71.4
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 7.2e-18 93.6 77 67.5
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 7.2e-18 93.6 74 74.3
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 9.3e-18 93.2 77 66.2
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 9.3e-18 93.2 77 66.2
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 9.3e-18 93.2 72 75.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 70.1
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 71.2
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 68.8
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 1.6e-17 92.4 78 70.5
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 67.5
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 68.8
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 71.4
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 63.6
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 4.6e-17 90.9 77 67.5
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 4.6e-17 90.9 75 64.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 6.1e-17 90.5 73 71.2
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 6.1e-17 90.5 72 66.7
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 6.1e-17 90.5 72 66.7
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 6.1e-17 90.5 72 66.7
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 6.1e-17 90.5 77 70.1
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 6.1e-17 90.5 77 67.5
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 7.9e-17 90.1 72 66.7
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 7.9e-17 90.1 72 66.7
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 1.0e-16 89.7 73 68.5
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 1.3e-16 89.4 72 72.2
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.3e-16 88.6 75 62.7
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 73 64.4
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 5.1e-16 87.4 75 64.0
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 6.7e-16 87.0 77 70.1
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.1e-15 86.3 72 66.7
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 1.1e-15 86.3 75 62.7
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.1e-15 86.3 141 45.4
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 1.5e-15 85.9 75 68.0
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.5e-15 85.9 77 70.1
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.5e-15 85.9 77 70.1
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.3e-15 84.3 77 68.8
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 7.4e-15 83.6 78 70.5
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 9.7e-15 83.2 78 64.1
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 8.2e-14 80.1 76 59.2
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 8.2e-14 80.1 52 80.8
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.1e-13 79.7 52 80.8
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 3.1e-13 78.2 136 41.9
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 4.1e-13 77.8 49 83.7
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 4.1e-13 77.8 51 78.4
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 9.1e-13 76.6 77 64.9
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 3.8e-11 71.2 50 74.0
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 6.5e-11 70.5 61 63.9
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.4e-10 69.3 78 55.1
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.5e-10 68.6 72 55.6
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 5.5e-10 67.4 77 53.2
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 8.8e-08 60.1 77 48.1
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 1.5e-07 59.3 76 47.4
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 3.3e-07 58.2 60 66.7
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 3.7e-06 54.7 59 52.5
MCO07G725 Micromonas commoda HOM05D005517 ORTHO05D006760 6.3e-06 53.9 49 55.1


User provided reference genes

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