Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 7.9e-158 560.5 296 100.0
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 9.2e-122 440.7 297 76.4
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 3.5e-121 438.7 292 78.1
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 1.0e-120 437.2 287 80.8
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.2e-118 430.3 295 77.3
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 1.2e-118 430.3 298 75.5
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 1.0e-117 427.2 291 78.4
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 3.1e-117 425.6 294 74.5
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 8.9e-117 424.1 294 76.9
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 1.2e-116 423.7 299 75.9
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 2.6e-116 422.5 300 74.7
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 2.6e-116 422.5 298 75.8
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 3.4e-116 422.2 292 75.0
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 5.8e-116 421.4 291 76.6
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 7.5e-116 421.0 295 75.3
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 7.5e-116 421.0 300 74.3
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 7.5e-116 421.0 291 76.3
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.3e-115 420.2 292 74.7
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.3e-115 420.2 292 74.7
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.7e-115 419.9 294 74.8
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 1.7e-115 419.9 300 75.0
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 2.2e-115 419.5 293 75.4
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 3.7e-115 418.7 293 75.4
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 1.4e-114 416.8 292 76.4
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 1.4e-114 416.8 292 75.3
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 4.1e-114 415.2 292 74.0
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 7.0e-114 414.5 292 74.0
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 2.0e-113 412.9 295 74.9
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 2.7e-113 412.5 299 74.6
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.5e-113 412.1 301 74.8
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 6.0e-113 411.4 302 73.2
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.0e-113 411.4 294 74.5
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 6.0e-113 411.4 299 74.6
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 1.0e-112 410.6 296 73.6
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 1.0e-112 410.6 299 74.2
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 1.3e-112 410.2 296 73.3
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.7e-112 409.8 294 74.5
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.7e-112 409.8 294 74.5
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 1.7e-112 409.8 297 72.4
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 3.9e-112 408.7 300 73.7
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 6.6e-112 407.9 296 73.6
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 8.6e-112 407.5 299 73.2
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 1.5e-111 406.8 299 73.6
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 4.3e-111 405.2 295 73.9
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 4.3e-111 405.2 292 72.6
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 9.5e-111 404.1 299 73.9
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 1.6e-110 403.3 295 71.5
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 2.8e-110 402.5 285 74.7
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 3.6e-110 402.1 288 73.6
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 3.6e-110 402.1 297 73.1
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 3.6e-110 402.1 295 70.8
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 6.2e-110 401.4 297 72.1
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 8.1e-110 401.0 298 69.5
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.1e-109 400.6 296 72.3
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.8e-109 399.8 293 71.3
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 3.1e-109 399.1 288 74.7
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 4.0e-109 398.7 284 74.3
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 4.0e-109 398.7 296 70.9
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 8.9e-109 397.5 296 70.9
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 2.0e-108 396.4 291 72.9
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 2.0e-108 396.4 296 72.6
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 2.6e-108 396.0 298 71.5
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 9.8e-108 394.0 354 62.7
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 1.7e-107 393.3 347 64.0
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 2.9e-107 392.5 347 63.7
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 3.7e-107 392.1 292 71.6
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.1e-106 390.6 290 70.7
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 1.4e-106 390.2 295 68.8
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 1.9e-106 389.8 295 72.2
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 3.2e-106 389.0 308 69.5
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 4.1e-106 388.7 293 71.0
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 4.1e-106 388.7 293 71.3
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 1.6e-105 386.7 295 69.5
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.6e-105 386.7 290 70.0
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 2.7e-105 386.0 284 71.5
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 6.0e-105 384.8 294 71.8
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 7.8e-105 384.4 285 71.6
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.3e-104 383.6 291 70.1
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.7e-104 383.3 288 71.2
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.7e-104 383.3 297 68.7
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 1.7e-104 383.3 288 70.8
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 2.3e-104 382.9 286 71.0
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 2.3e-104 382.9 289 71.3
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 6.6e-104 381.3 277 72.6
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 6.6e-104 381.3 277 72.6
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 8.6e-104 380.9 296 70.9
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 2.5e-103 379.4 289 71.3
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 4.3e-103 378.6 298 69.1
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 7.3e-103 377.9 268 73.9
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 9.5e-103 377.5 317 64.4
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 1.6e-102 376.7 299 67.2
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 1.1e-101 374.0 238 79.4
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 1.4e-101 373.6 335 63.6
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.8e-101 373.2 297 66.7
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 2.3e-101 372.9 292 68.8
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 5.2e-101 371.7 294 69.0
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 1.5e-100 370.2 294 67.3
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 2.6e-100 369.4 321 64.5
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 5.8e-100 368.2 291 69.1
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 5.8e-100 368.2 291 69.1
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 9.9e-100 367.5 291 68.4
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 9.9e-100 367.5 291 68.4
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 1.7e-99 366.7 291 68.4
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 2.2e-99 366.3 294 68.0
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 4.9e-99 365.2 292 67.5
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 6.4e-99 364.8 246 76.0
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 3.2e-98 362.5 293 67.6
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 4.1e-98 362.1 302 67.2
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 1.6e-97 360.1 295 66.8
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 3.5e-97 359.0 293 66.6
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 6.0e-97 358.2 353 57.8
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-96 357.1 300 67.7
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 1.3e-96 357.1 269 70.3
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 3.9e-96 355.5 293 66.6
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 6.6e-96 354.8 292 65.1
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 8.6e-96 354.4 300 63.7
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 8.6e-96 354.4 299 65.9
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 4.3e-95 352.1 245 75.1
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 4.3e-95 352.1 329 61.7
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 1.8e-93 346.7 294 65.3
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 8.9e-93 344.4 293 62.8
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 1.2e-92 344.0 230 74.8
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 5.8e-92 341.7 229 75.1
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 2.4e-90 336.3 224 74.6
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 1.6e-89 333.6 288 66.0
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.7e-88 330.1 266 66.5
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 3.9e-88 328.9 293 63.1
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 2.6e-84 316.2 230 71.7
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 6.4e-83 311.6 220 70.5
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 8.4e-83 311.2 219 73.1
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 4.2e-82 308.9 228 69.3
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 7.9e-81 304.7 203 77.3
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 1.5e-79 300.4 230 70.0
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.8e-77 293.5 232 63.8
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 5.3e-77 292.0 289 58.5
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 4.2e-74 282.3 201 68.7
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 2.7e-73 279.6 195 74.4
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 3.5e-73 279.3 232 65.1
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 3.9e-72 275.8 265 59.2
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 6.7e-72 275.0 277 54.2
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 4.5e-68 262.3 191 71.2
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 7.6e-68 261.5 185 70.8
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 2.2e-59 233.4 218 54.1
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.3e-54 217.6 221 53.8
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 1.7e-51 207.2 234 48.3
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 2.2e-46 190.3 180 53.9
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 5.0e-43 179.1 150 60.0
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 1.9e-42 177.2 215 44.7
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 3.2e-42 176.4 261 43.3
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 1.5e-23 114.4 156 46.8
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 2.0e-23 114.0 71 84.5
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 7.0e-21 105.5 64 85.9
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 3.5e-20 103.2 59 88.1
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 9.2e-13 78.6 127 39.4
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-11 74.7 121 43.0
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 7.3e-10 68.9 56 66.1


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