Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 8.5e-88 327.0 170 100.0
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 5.8e-44 181.4 174 59.2
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.3e-43 180.3 158 62.7
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 7.0e-42 174.5 111 81.1
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.7e-41 172.6 109 76.1
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 3.5e-41 172.2 169 59.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.6e-41 171.8 162 59.3
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 7.8e-41 171.0 159 62.3
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.3e-40 170.2 108 77.8
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-40 170.2 108 77.8
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.7e-40 169.9 135 69.6
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.7e-40 169.9 132 71.2
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.7e-40 169.9 158 62.0
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.7e-40 169.9 110 77.3
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 3.9e-40 168.7 138 68.1
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.9e-40 168.7 162 58.6
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.6e-40 167.5 103 78.6
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.1e-39 167.2 167 55.7
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.9e-39 166.4 109 76.1
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.5e-39 166.0 108 75.9
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 5.6e-39 164.9 125 68.8
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.2e-38 163.7 102 80.4
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.2e-38 163.7 104 76.9
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 2.1e-38 162.9 109 75.2
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.1e-38 162.9 109 75.2
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.1e-38 162.9 110 74.5
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.8e-38 162.5 109 74.3
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.8e-38 162.5 109 74.3
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.8e-38 162.5 108 76.9
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.8e-38 162.5 103 78.6
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.8e-38 162.5 106 78.3
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 3.6e-38 162.2 109 75.2
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 3.6e-38 162.2 104 78.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 3.6e-38 162.2 104 78.8
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 3.6e-38 162.2 162 56.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 4.7e-38 161.8 168 54.8
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 4.7e-38 161.8 141 63.1
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 6.2e-38 161.4 103 77.7
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 6.2e-38 161.4 109 73.4
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.2e-38 161.4 107 74.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 6.2e-38 161.4 109 74.3
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 8.1e-38 161.0 96 80.2
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 8.1e-38 161.0 109 74.3
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.4e-37 160.2 110 74.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.4e-37 160.2 105 78.1
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.8e-37 159.8 109 72.5
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.8e-37 159.8 109 72.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.8e-37 159.8 149 57.7
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.3e-37 159.5 174 53.4
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.3e-37 159.5 96 80.2
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 3.1e-37 159.1 108 73.1
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 3.1e-37 159.1 94 79.8
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 5.2e-37 158.3 109 72.5
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.2e-36 157.1 93 79.6
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 1.2e-36 157.1 114 71.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.5e-36 156.8 106 71.7
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.5e-36 156.8 93 79.6
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.5e-36 156.8 123 67.5
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 2.0e-36 156.4 146 58.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 2.0e-36 156.4 110 74.5
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.6e-36 156.0 110 70.9
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 4.4e-36 155.2 106 76.4
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 7.5e-36 154.5 164 53.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 9.8e-36 154.1 106 73.6
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 9.8e-36 154.1 93 76.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 9.8e-36 154.1 93 76.3
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 9.8e-36 154.1 127 63.8
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.3e-35 153.7 116 67.2
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.3e-35 153.7 108 72.2
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.9e-35 152.5 122 66.4
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 4.9e-35 151.8 108 67.6
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.4e-34 148.3 177 52.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.4e-34 148.3 177 52.5
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 9.2e-34 147.5 110 67.3
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.1e-33 146.4 92 77.2
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 2.1e-33 146.4 120 65.0
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.0e-32 144.1 147 56.5
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 5.1e-32 141.7 165 53.3
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 8.6e-32 141.0 93 74.2
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.5e-31 139.4 110 64.5
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 5.6e-31 138.3 110 64.5
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 1.6e-30 136.7 161 46.6
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 8.1e-30 134.4 79 82.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.8e-29 133.3 94 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 3.1e-29 132.5 94 68.1
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 4.4e-28 128.6 71 84.5
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 6.4e-27 124.8 106 61.3
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 3.5e-25 119.0 76 77.6
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.0e-24 117.5 75 76.0
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.3e-24 117.1 92 64.1
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 1.3e-24 117.1 63 88.9
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.3e-24 116.3 62 88.7
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 5.6e-23 111.7 64 81.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.5e-20 103.6 63 74.6
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.4e-20 102.1 116 48.3
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.1e-17 93.2 70 65.7
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 8.1e-06 54.7 49 61.2


User provided reference genes

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