Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 8.1e-302 1039.6 536 100.0
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 2.1e-225 785.8 531 72.1
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 1.8e-224 782.7 532 74.2
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 8.8e-224 780.4 526 75.5
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 1.5e-223 779.6 525 75.0
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 4.1e-221 771.5 532 72.4
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 5.0e-219 764.6 533 71.7
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 4.3e-218 761.5 535 71.0
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 1.3e-214 750.0 463 76.7
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 2.2e-214 749.2 522 69.3
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 2.4e-213 745.7 529 68.8
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 4.1e-213 745.0 458 76.4
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 9.2e-213 743.8 467 74.5
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 1.2e-212 743.4 522 68.8
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 2.0e-212 742.7 529 69.4
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 2.3e-211 739.2 451 76.5
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 3.9e-211 738.4 451 76.1
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 3.9e-211 738.4 523 70.4
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 1.5e-210 736.5 514 70.6
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 3.3e-210 735.3 527 70.8
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 3.6e-209 731.9 469 74.2
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 3.6e-209 731.9 465 74.4
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 4.7e-209 731.5 465 73.8
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 1.0e-208 730.3 469 74.0
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 6.8e-208 727.6 460 75.0
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 5.8e-207 724.5 531 71.0
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 7.5e-207 724.2 460 73.9
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 1.7e-206 723.0 536 67.7
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 1.7e-206 723.0 535 67.1
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 1.9e-205 719.5 471 72.4
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 5.4e-205 718.0 458 74.5
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 7.0e-205 717.6 535 66.5
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.6e-204 716.5 505 68.3
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 2.7e-204 715.7 455 74.3
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.0e-203 713.8 463 73.9
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.0e-203 713.8 437 75.1
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 3.9e-203 711.8 464 71.1
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 8.6e-203 710.7 460 72.0
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 1.1e-202 710.3 469 71.4
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 1.5e-202 709.9 464 70.9
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.9e-202 709.5 536 67.2
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 9.5e-202 707.2 524 66.2
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 9.5e-202 707.2 537 65.5
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 9.5e-202 707.2 525 66.5
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 8.1e-201 704.1 553 65.8
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 1.1e-200 703.7 464 72.2
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 1.4e-200 703.4 519 68.2
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 2.3e-200 702.6 529 66.9
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 6.8e-200 701.0 473 70.2
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 6.8e-200 701.0 514 66.0
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 8.9e-200 700.7 457 71.1
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 1.5e-199 699.9 447 72.0
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 2.6e-199 699.1 474 70.3
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 9.8e-199 697.2 520 69.2
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 1.7e-198 696.4 474 70.0
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 2.2e-198 696.0 478 69.7
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 2.2e-198 696.0 474 70.0
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 3.7e-198 695.3 437 73.7
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 3.7e-198 695.3 459 70.8
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 4.9e-198 694.9 459 70.6
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 6.4e-198 694.5 504 67.3
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 7.1e-197 691.0 498 67.5
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 2.3e-195 686.0 437 72.3
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 3.9e-195 685.3 516 65.1
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 6.6e-195 684.5 459 69.3
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 1.1e-194 683.7 462 69.3
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.5e-194 682.6 525 68.6
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 5.6e-194 681.4 450 71.6
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 7.3e-194 681.0 482 68.0
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 1.2e-193 680.2 502 65.3
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 1.8e-192 676.4 460 70.7
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 4.4e-191 671.8 495 65.1
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 4.1e-189 665.2 473 67.0
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 2.3e-187 659.4 474 65.8
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 5.6e-186 654.8 459 68.0
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 2.6e-183 646.0 416 74.8
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 6.4e-182 641.3 465 67.3
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 7.1e-181 637.9 406 75.1
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 1.6e-180 636.7 448 68.5
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 4.6e-180 635.2 523 60.2
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.5e-178 630.2 447 67.6
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 2.0e-175 619.8 412 70.1
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 3.8e-174 615.5 463 62.0
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 6.0e-172 608.2 436 65.8
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 4.3e-170 602.1 464 62.1
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 9.3e-165 584.3 526 58.6
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 7.4e-162 574.7 460 61.5
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 1.6e-153 547.0 529 59.0
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 7.4e-146 521.5 462 53.9
FAN05G4989 Fragaria x ananassa HOM05D005888 ORTHO05D007791 3.7e-145 519.2 364 70.3
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 7.2e-141 505.0 467 51.0
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 9.1e-136 488.0 446 51.8
CAN.G1751.4 Capsicum annuum HOM05D005888 ORTHO05D007791 7.7e-135 485.0 335 69.3
TAR374G0091 Trochodendron aralioides HOM05D005888 ORTHO05D007791 2.2e-134 483.4 323 72.1
Hma1.2p1_0279F.1_g112640 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.9e-133 480.3 315 71.7
Ca_11801_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 2.1e-132 476.9 340 69.4
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 8.5e-126 454.9 406 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 3.0e-115 419.9 405 49.9
Os01g0920300 Oryza sativa ssp. japonica HOM05D005888 ORTHO05D007791 6.5e-110 402.1 309 62.5
Actinidia36191 Actinidia chinensis HOM05D005888 ORTHO05D007791 2.5e-109 400.2 265 72.8
VMungo1383G0859 Vigna mungo HOM05D005888 ORTHO05D007791 1.8e-104 384.0 303 64.7
CBR_g38076 Chara braunii HOM05D005888 ORTHO05D007791 2.0e-103 380.6 361 48.5
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 2.7e-95 353.6 408 49.0
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 2.1e-92 344.0 199 76.4
Atru.chr6.2542 Acer truncatum HOM05D005888 ORTHO05D007791 1.7e-86 324.3 293 56.3
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 9.9e-82 308.5 468 40.0
BcaC06g31013 Brassica carinata HOM05D005888 ORTHO05D007791 1.1e-80 305.1 223 66.8
CSS0026485 Camellia sinensis var. sinensis HOM05D005888 ORTHO05D007791 6.2e-76 289.3 211 64.9
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 4.6e-63 246.5 496 32.3
FAN09G0079 Fragaria x ananassa HOM05D000071 ORTHO05D007791 2.6e-58 230.7 121 81.0
Ca_27688_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 2.5e-40 171.0 154 54.5
PRCOL_00001844 Prasinoderma coloniale HOM05D005888 ORTHO05D007791 6.9e-35 152.9 461 29.9
Atru.chr6.2543 Acer truncatum HOM05D005888 ORTHO05D007791 3.6e-31 140.6 88 72.7
RcHm_v2.0_Chr7g0179331 Rosa chinensis HOM05D005888 ORTHO05D007791 3.1e-27 127.5 94 67.0
Cre13.g578012 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 1.3e-25 122.1 381 26.2
SEGI_20285 Sequoiadendron giganteum HOM05D005888 ORTHO05D007791 3.1e-19 100.9 73 61.6
GSVIVG01006690001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.5e-18 98.6 83 60.2
Pp3s32_330 Physcomitrium patens HOM05D005216 ORTHO05D006453 4.5e-18 97.1 381 24.9
GSVIVG01033112001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.7e-17 95.1 65 63.1
MD17G1013100 Malus domestica HOM05D005888 ORTHO05D007791 3.8e-17 94.0 116 50.9
Cre13.g578201 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 1.4e-16 92.0 171 31.6
BcaNung06416 Brassica carinata HOM05D005888 ORTHO05D007791 2.7e-15 87.8 50 72.0
GSVIVG01006789001 Vitis vinifera HOM05D005888 ORTHO05D007791 1.1e-11 75.9 78 52.6
GSVIVG01033118001 Vitis vinifera HOM05D005888 ORTHO05D007791 2.9e-09 67.8 80 47.5
MCO09G155 Micromonas commoda HOM05D005216 ORTHO05D006453 8.5e-09 66.2 381 22.6
RcHm_v2.0_Chr7g0239971 Rosa chinensis HOM05D005888 ORTHO05D007791 1.1e-08 65.9 38 68.4
FAN18G4156 Fragaria x ananassa HOM05D005888 ORTHO05D045398 9.4e-08 62.8 37 70.3


User provided reference genes

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