Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1128 Cannabis sativa HOM05D008038 ORTHO05D006902 3.6e-286 987.6 526 100.0
CANSAT64G2812 Cannabis sativa HOM05D008038 ORTHO05D006902 3.8e-272 941.0 541 92.4
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 4.1e-125 452.6 522 48.9
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 2.1e-124 450.3 554 48.6
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 6.2e-121 438.7 546 47.3
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 6.0e-116 422.2 527 45.5
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 1.7e-115 420.6 522 46.9
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 2.5e-114 416.8 515 46.4
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 2.1e-113 413.7 553 45.2
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 3.2e-109 399.8 520 43.3
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 6.0e-108 395.6 539 44.2
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 2.3e-107 393.7 505 47.3
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 3.0e-107 393.3 552 42.2
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 1.4e-104 384.4 528 43.9
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 9.0e-104 381.7 512 46.7
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 9.0e-104 381.7 454 47.1
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 1.2e-103 381.3 558 41.9
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 2.0e-103 380.6 504 43.1
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 1.7e-102 377.5 522 43.3
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 1.1e-101 374.8 538 42.4
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 2.4e-101 373.6 557 42.4
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 9.3e-101 371.7 523 43.2
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 1.6e-100 370.9 523 43.2
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 2.7e-100 370.2 523 43.2
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 3.5e-100 369.8 456 45.8
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 4.6e-100 369.4 528 43.4
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 1.8e-99 367.5 504 44.6
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 3.0e-99 366.7 463 44.9
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 3.0e-99 366.7 454 44.3
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 6.7e-99 365.5 523 42.3
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 7.4e-98 362.1 509 42.8
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 1.4e-96 357.8 465 44.5
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 4.0e-96 356.3 462 43.1
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 1.2e-95 354.8 539 41.0
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 2.6e-95 353.6 454 45.2
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 7.6e-95 352.1 462 42.4
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 4.9e-94 349.4 458 43.2
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 2.1e-92 344.0 495 39.8
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 2.7e-92 343.6 453 43.5
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 7.9e-92 342.0 495 39.4
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.1e-88 331.6 449 42.8
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 1.3e-86 324.7 428 43.9
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 1.1e-85 321.6 434 44.5
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 1.1e-85 321.6 457 43.1
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 9.3e-85 318.5 380 45.3
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 4.6e-84 316.2 476 39.1
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 2.5e-82 310.5 455 39.3
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 2.8e-81 307.0 455 38.7
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 4.8e-81 306.2 460 41.3
Pp3c20_2590 Physcomitrium patens HOM05D008038 ORTHO05D006902 6.9e-80 302.4 451 39.2
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 5.7e-74 282.7 477 37.5
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 4.8e-73 279.6 535 35.3
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 1.0e-70 271.9 562 35.4
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 2.9e-70 270.4 337 43.6
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 2.0e-63 247.7 362 41.7
CAN.G1481.4 Capsicum annuum HOM05D008038 ORTHO05D006902 3.2e-61 240.4 467 35.3
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 8.0e-52 209.1 451 31.9
Pp3c19_4830 Physcomitrium patens HOM05D008038 ORTHO05D006902 7.0e-48 196.1 528 29.7
PRCOL_00002007 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 3.2e-45 187.2 461 28.6
Peaxi162Scf00154g00619 Petunia axillaris HOM05D008038 ORTHO05D006902 1.8e-40 171.4 280 37.9
Mapoly0207s0005 Marchantia polymorpha HOM05D008038 ORTHO05D006902 4.0e-35 153.7 553 27.1
Nitab4.5_0001121g0160 Nicotiana tabacum HOM05D008038 ORTHO05D006902 1.3e-33 148.7 247 39.7
Cre12.g551550 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 4.1e-24 117.1 361 26.0
Cre06.g296150 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.7e-22 111.7 564 23.0
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 2.3e-22 111.3 437 26.3
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 1.2e-20 105.5 438 25.6
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-20 105.5 449 24.3
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 8.1e-20 102.8 508 24.2
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 8.1e-20 102.8 508 24.2
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.4e-19 102.1 511 24.5
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 5.2e-19 100.1 496 23.8
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-17 95.1 456 25.2
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-17 94.4 449 23.4
Cre16.g685613 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 3.7e-17 94.0 337 25.8
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.9e-16 91.7 481 23.3
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.4e-16 91.3 448 25.4
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.2e-16 89.4 459 23.1
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-15 89.0 483 23.4
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.6e-15 87.0 460 23.5
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.0e-15 86.7 483 23.2
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 1.7e-14 85.1 512 24.0
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.3e-14 84.7 483 23.0
C03p47420 Brassica napus HOM05D000096 ORTHO05D000045 5.1e-14 83.6 475 24.8
Aqoxy4G02573 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.5e-13 81.3 462 25.1
A01p15630 Brassica napus HOM05D000096 ORTHO05D000045 5.6e-13 80.1 467 23.8
FvH4_7g14272 Fragaria vesca HOM05D000096 ORTHO05D000045 7.3e-13 79.7 498 25.1
A05p20940 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-12 79.0 440 23.9
C02p38310 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-12 77.8 491 23.8
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.6e-12 77.4 469 23.9
C03p65010 Brassica napus HOM05D000096 ORTHO05D000045 8.1e-12 76.3 512 23.4
SEGI_23601 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 1.4e-11 75.5 420 22.4
FvH4_5g25262 Fragaria vesca HOM05D000096 ORTHO05D000045 2.3e-11 74.7 459 24.4
C06p16690 Brassica napus HOM05D000096 ORTHO05D000045 4.0e-11 73.9 457 22.8
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.9e-11 72.8 407 24.8
A09p34240 Brassica napus HOM05D000096 ORTHO05D000045 5.8e-10 70.1 492 24.0
Cre02.g141406 Chlamydomonas reinhardtii HOM05D023639 ORTHO05D022347 9.9e-10 69.3 502 24.9
C08p09500 Brassica napus HOM05D000096 ORTHO05D000045 1.7e-09 68.6 444 24.3
PSO334G0009 Papaver somniferum HOM05D000096 ORTHO05D000045 1.7e-09 68.6 457 22.1
ECA233G3626 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-09 67.4 453 21.9
PSO170G1544 Papaver somniferum HOM05D000096 ORTHO05D000045 4.9e-09 67.0 486 22.0
TWI81G0429 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 6.4e-09 66.6 433 21.9
ECA236G1692 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.4e-09 66.2 199 25.6
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-08 65.5 159 26.4
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-08 65.1 404 23.3
PSO731G0091 Papaver somniferum HOM05D000096 ORTHO05D000045 3.2e-08 64.3 431 22.5
PSO017G0197 Papaver somniferum HOM05D000096 ORTHO05D000045 5.4e-08 63.5 471 21.7
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.1e-08 63.2 271 25.1
Cre12.g485438 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.2e-07 62.4 94 39.4
ECA236G1226 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-07 62.4 456 21.7
SEGI_04271 Sequoiadendron giganteum HOM05D012154 ORTHO05D006902 1.2e-07 62.4 418 21.1
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-07 62.0 405 23.5
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-07 62.0 322 26.1
FvH4_5g24553 Fragaria vesca HOM05D000096 ORTHO05D000045 2.1e-07 61.6 419 23.9
Aqoxy2G01285 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.7e-07 61.2 469 22.0
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.0e-07 60.1 469 24.3
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.8e-07 59.7 433 23.6
C01p17350 Brassica napus HOM05D000096 ORTHO05D000045 1.0e-06 59.3 492 22.8
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-06 59.3 341 23.5
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-06 59.3 196 25.0
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-06 59.3 341 23.5
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-06 58.5 469 22.6
FAN14G3324 Fragaria x ananassa HOM05D008038 ORTHO05D006902 1.7e-06 58.5 67 44.8
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-06 58.5 370 22.2
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.0e-06 57.8 335 23.6
CANSAT25G3526 Cannabis sativa HOM05D000096 ORTHO05D000045 3.9e-06 57.4 474 22.4
ECA232G1482 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.9e-06 57.4 295 21.7
Cre12.g512100 Chlamydomonas reinhardtii HOM05D023639 ORTHO05D022347 5.1e-06 57.0 474 22.8
CiPaw.06G004900 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.6e-06 56.2 469 22.8
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 8.6e-06 56.2 173 26.0


User provided reference genes

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