Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1109 Cannabis sativa HOM05D003549 ORTHO05D004223 5.1e-21 104.0 74 100.0
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 1.2e-17 92.8 74 75.7
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 5.8e-17 90.5 73 74.0
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 6.4e-16 87.0 74 77.0
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 1.9e-15 85.5 74 64.9
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 2.4e-15 85.1 72 76.4
Cpa.g.sc1914.1 Carica papaya HOM05D003549 ORTHO05D004223 5.4e-15 84.0 46 89.1
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.2e-14 82.8 72 73.6
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.2e-14 82.8 72 73.6
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.2e-14 82.8 72 73.6
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.2e-14 82.8 72 73.6
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 2.1e-14 82.0 74 71.6
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 2.7e-14 81.6 72 73.6
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.7e-14 81.6 72 73.6
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.7e-14 81.6 74 68.9
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 4.6e-14 80.9 74 70.3
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 7.9e-14 80.1 74 68.9
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 7.9e-14 80.1 74 67.6
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 1.0e-13 79.7 71 73.2
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 1.3e-13 79.3 74 71.6
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 1.3e-13 79.3 74 67.6
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 2.3e-13 78.6 74 68.9
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 3.0e-13 78.2 74 67.6
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 3.0e-13 78.2 69 69.6
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 3.9e-13 77.8 74 68.9
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 5.1e-13 77.4 74 66.2
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 5.1e-13 77.4 73 72.6
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 6.7e-13 77.0 74 73.0
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 6.7e-13 77.0 74 73.0
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 6.7e-13 77.0 72 65.3
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 6.7e-13 77.0 72 59.7
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 8.7e-13 76.6 74 67.6
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 1.1e-12 76.3 72 68.1
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.1e-12 76.3 74 66.2
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 1.5e-12 75.9 74 67.6
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.5e-12 75.9 74 63.5
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 1.9e-12 75.5 72 63.9
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 1.9e-12 75.5 74 63.5
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 2.5e-12 75.1 74 63.5
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 2.5e-12 75.1 74 70.3
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 2.5e-12 75.1 72 55.6
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 3.3e-12 74.7 72 62.5
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 4.3e-12 74.3 74 60.8
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 4.3e-12 74.3 72 62.5
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 4.3e-12 74.3 72 62.5
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 4.3e-12 74.3 74 67.6
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 5.6e-12 73.9 74 66.2
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 7.4e-12 73.6 72 62.5
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 7.4e-12 73.6 74 71.6
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 1.3e-11 72.8 69 71.0
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 1.3e-11 72.8 72 62.5
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 1.3e-11 72.8 74 64.9
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 1.3e-11 72.8 47 78.7
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.3e-11 72.8 74 55.4
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 1.6e-11 72.4 69 68.1
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.6e-11 72.4 69 68.1
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 1.6e-11 72.4 74 63.5
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 1.6e-11 72.4 72 73.6
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 1.6e-11 72.4 69 65.2
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 2.1e-11 72.0 74 64.9
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 2.1e-11 72.0 72 66.7
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 2.1e-11 72.0 67 76.1
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 2.1e-11 72.0 73 65.8
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 2.8e-11 71.6 76 57.9
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 70.3
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 70.3
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 70.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 63.5
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.8e-11 71.6 73 63.0
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 66.2
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 66.2
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.8e-11 71.6 74 66.2
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 69 65.2
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 69 65.2
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 69 65.2
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 4.8e-11 70.9 74 66.2
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 4.8e-11 70.9 69 68.1
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 4.8e-11 70.9 69 71.0
Manes.06G103400 Manihot esculenta HOM05D003549 ORTHO05D004223 6.2e-11 70.5 47 76.6
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 6.2e-11 70.5 69 63.8
PGSC0003DMG400027096 Solanum tuberosum HOM05D003549 ORTHO05D004223 8.1e-11 70.1 72 68.1
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 1.1e-10 69.7 69 66.7
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 1.1e-10 69.7 46 78.3
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 1.1e-10 69.7 73 65.8
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 1.4e-10 69.3 72 66.7
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 1.4e-10 69.3 72 66.7
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.4e-10 69.3 74 58.1
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.4e-10 69.3 74 58.1
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 1.8e-10 68.9 69 62.3
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 1.8e-10 68.9 71 60.6
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 1.8e-10 68.9 74 55.4
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 1.8e-10 68.9 72 66.7
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 2.4e-10 68.6 71 57.7
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 4.0e-10 67.8 74 64.9
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 4.0e-10 67.8 75 66.7
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 4.0e-10 67.8 82 63.4
Atru.chr9.2446 Acer truncatum HOM05D003549 ORTHO05D004223 6.9e-10 67.0 47 70.2
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 6.9e-10 67.0 69 68.1
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 9.0e-10 66.6 79 57.0
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 9.0e-10 66.6 72 58.3
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.2e-09 66.2 74 55.4
CARHR049490 Cardamine hirsuta HOM05D003549 ORTHO05D004223 2.6e-09 65.1 74 66.2
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 2.6e-09 65.1 72 56.9
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 2.6e-09 65.1 71 69.0
CAN.G208.13 Capsicum annuum HOM05D003549 ORTHO05D004223 4.5e-09 64.3 45 71.1
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 4.5e-09 64.3 68 67.6
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 4.5e-09 64.3 74 64.9
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 4.5e-09 64.3 74 54.1
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 1.0e-08 63.2 69 52.2
Aqoxy3G00999 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.3e-08 62.8 74 66.2
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 1.3e-08 62.8 69 68.1
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 1.3e-08 62.8 76 63.2
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 1.3e-08 62.8 72 55.6
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.3e-08 62.8 74 54.1
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 1.7e-08 62.4 72 48.6
CAN.G650.26 Capsicum annuum HOM05D003549 ORTHO05D004223 2.2e-08 62.0 45 68.9
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 2.2e-08 62.0 69 52.2
Eucgr.K02857 Eucalyptus grandis HOM05D003549 ORTHO05D004223 3.8e-08 61.2 74 67.6
Hma1.2p1_0967F.1_g242260 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 4.9e-08 60.8 58 62.1
ECA247G2394 Erigeron canadensis HOM05D003549 ORTHO05D004223 8.4e-08 60.1 77 59.7
Carub.0003s3029 Capsella rubella HOM05D003549 ORTHO05D004223 1.1e-07 59.7 72 76.4
Peaxi162Scf00689g00329 Petunia axillaris HOM05D003549 ORTHO05D004223 1.1e-07 59.7 72 61.1
AT5G45010 Arabidopsis thaliana HOM05D003549 ORTHO05D004223 1.4e-07 59.3 47 70.2
AL2G18990 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 1.9e-07 58.9 75 66.7
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 1.9e-07 58.9 67 59.7
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 2.5e-07 58.5 47 66.0
HanXRQChr02g0037231 Helianthus annuus HOM05D003549 ORTHO05D004223 2.5e-07 58.5 72 65.3
AL8G14410 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 3.2e-07 58.2 74 64.9
Aqoxy3G02997 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 5.5e-07 57.4 75 64.0
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 5.5e-07 57.4 75 62.7
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 5.5e-07 57.4 74 62.2
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 7.1e-07 57.0 72 59.7
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 9.3e-07 56.6 73 57.5
Gohir.D07G065000 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.6e-06 55.8 43 67.4
Gorai.001G068500 Gossypium raimondii HOM05D003549 ORTHO05D004223 1.6e-06 55.8 43 67.4
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 2.1e-06 55.5 70 57.1
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 2.1e-06 55.5 70 57.1
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 2.1e-06 55.5 70 57.1
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 2.1e-06 55.5 70 57.1
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 2.7e-06 55.1 35 74.3
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 3.5e-06 54.7 74 63.5


User provided reference genes

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