Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 5.4e-47 190.7 96 100.0
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.7e-37 159.1 94 86.2
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 2.3e-37 158.7 87 90.8
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.9e-37 157.9 96 84.4
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 6.6e-37 157.1 94 84.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 8.6e-37 156.8 94 86.2
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.9e-36 155.6 87 88.5
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.9e-36 155.6 96 83.3
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.5e-36 155.2 93 84.9
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 3.3e-36 154.8 96 82.3
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 3.3e-36 154.8 87 86.2
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 3.3e-36 154.8 95 87.4
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.3e-36 154.5 88 86.4
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 5.6e-36 154.1 95 84.2
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 5.6e-36 154.1 81 92.6
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.6e-36 154.1 93 83.9
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 7.3e-36 153.7 92 84.8
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 9.5e-36 153.3 96 83.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 9.5e-36 153.3 96 83.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 9.5e-36 153.3 93 81.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.2e-35 152.9 89 84.3
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.2e-35 152.9 89 84.3
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.2e-35 152.9 96 82.3
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.2e-35 152.9 87 87.4
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.6e-35 152.5 96 80.2
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.6e-35 152.5 91 86.8
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 83.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.8e-35 151.8 96 83.3
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.8e-35 151.8 85 87.1
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.6e-35 151.4 96 82.3
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.1e-35 150.6 81 90.1
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 6.1e-35 150.6 94 81.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 8.0e-35 150.2 80 93.8
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 8.0e-35 150.2 86 84.9
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 8.0e-35 150.2 85 89.4
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.0e-34 149.8 88 85.2
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.0e-34 149.8 97 80.4
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.4e-34 149.4 84 86.9
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.4e-34 149.4 94 80.9
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.8e-34 149.1 96 80.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.3e-34 148.7 96 80.2
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.0e-34 147.9 86 83.7
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 5.2e-34 147.5 87 83.9
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.2e-33 146.4 84 84.5
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.2e-33 146.4 84 84.5
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.5e-33 146.0 80 91.2
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.5e-33 146.0 81 88.9
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.5e-33 146.0 90 80.0
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 2.6e-33 145.2 84 84.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.6e-33 145.2 85 84.7
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.6e-33 145.2 96 79.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.6e-33 145.2 96 79.2
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.6e-33 145.2 81 87.7
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 4.4e-33 144.4 95 77.9
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 4.4e-33 144.4 84 83.3
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 5.8e-33 144.1 84 82.1
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 7.5e-33 143.7 92 80.4
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 7.5e-33 143.7 92 80.4
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.7e-32 142.5 81 82.7
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.9e-32 141.7 94 74.5
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.9e-32 141.7 92 79.3
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.9e-32 141.0 81 80.2
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.1e-31 139.8 96 76.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.4e-31 139.4 81 86.4
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.9e-31 139.0 74 89.2
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.2e-31 138.3 98 73.5
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.2e-31 138.3 92 78.3
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 3.2e-31 138.3 82 86.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.2e-31 138.3 82 86.6
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 7.0e-31 137.1 120 65.0
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 9.2e-31 136.7 111 69.4
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.0e-30 135.6 100 74.0
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 2.7e-30 135.2 82 84.1
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.5e-30 134.8 85 77.6
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 3.5e-30 134.8 84 79.8
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 79.8
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 6.0e-30 134.0 82 79.3
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 6.0e-30 134.0 84 78.6
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 78.0
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 78.0
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 78.0
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.3e-29 132.9 77 80.5
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 81.7
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 87 73.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-29 132.5 87 73.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-29 132.5 87 73.6
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.0e-29 131.7 81 77.8
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.0e-29 131.7 114 64.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 6.6e-29 130.6 97 68.0
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.6e-29 130.6 82 81.7
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 6.6e-29 130.6 96 66.7
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 8.6e-29 130.2 92 69.6
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 129.8 92 69.6
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 129.8 92 69.6
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-28 129.8 92 69.6
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.1e-28 129.8 92 69.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.5e-28 129.4 82 76.8
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.9e-28 129.0 82 76.8
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.3e-28 128.3 92 68.5
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.3e-28 128.3 79 86.1
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 4.3e-28 127.9 82 76.8
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 4.3e-28 127.9 77 77.9
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 2.1e-27 125.6 80 82.5
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.1e-27 125.6 85 70.6
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.8e-27 125.2 76 76.3
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 8.0e-27 123.6 82 74.4
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 1.1e-26 123.2 75 82.7
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.3e-26 122.1 72 88.9
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 3.1e-26 121.7 85 78.8
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 8.9e-26 120.2 82 76.8
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.0e-25 119.0 74 78.4
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.0e-25 119.0 85 67.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 2.6e-25 118.6 69 89.9
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.4e-25 118.2 82 75.6
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 77 75.3
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 4.9e-24 114.4 66 81.8
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.4e-23 112.8 67 80.6
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 4.3e-20 101.3 67 74.6
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 7.3e-20 100.5 85 67.1
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 4.7e-19 97.8 85 63.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-18 96.7 82 59.8
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 7.6e-17 90.5 64 73.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 8.3e-16 87.0 47 87.2
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.7e-14 82.0 65 56.9
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 6.0e-14 80.9 63 58.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.3e-13 79.0 61 67.2
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 8.1e-11 70.5 60 56.7
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.1e-10 70.1 75 52.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-08 62.0 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-08 62.0 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-08 62.0 48 62.5
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 6.0e-06 54.3 74 43.2


User provided reference genes

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