Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 2.4e-47 191.8 97 100.0
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.1e-39 166.4 93 86.0
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.0e-37 159.8 88 86.4
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.7e-37 159.1 93 81.7
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 2.3e-37 158.7 90 83.3
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 3.9e-37 157.9 93 80.6
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 6.6e-37 157.1 93 83.9
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 6.6e-37 157.1 93 80.6
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 6.6e-37 157.1 93 78.5
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 6.6e-37 157.1 93 78.5
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 8.7e-37 156.8 93 78.5
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 8.7e-37 156.8 91 82.4
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.7e-37 156.8 93 78.5
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 8.7e-37 156.8 93 78.5
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.1e-36 156.4 91 79.1
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.5e-36 156.0 93 78.5
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 3.3e-36 154.8 93 78.5
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 4.3e-36 154.5 88 83.0
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 4.3e-36 154.5 93 78.5
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 4.3e-36 154.5 93 77.4
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 4.3e-36 154.5 88 83.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 4.3e-36 154.5 93 81.7
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.3e-36 154.5 93 78.5
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 5.6e-36 154.1 92 81.5
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 5.6e-36 154.1 93 78.5
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 7.3e-36 153.7 93 78.5
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 7.3e-36 153.7 92 77.2
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.3e-36 153.7 92 77.2
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.3e-36 153.7 92 77.2
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 9.6e-36 153.3 89 82.0
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.6e-36 153.3 93 77.4
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 9.6e-36 153.3 93 76.3
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 9.6e-36 153.3 88 81.8
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.3e-35 152.9 88 81.8
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.3e-35 152.9 88 84.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.6e-35 152.5 92 77.2
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.1e-35 152.1 93 75.3
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 2.8e-35 151.8 93 77.4
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.6e-35 151.4 86 82.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.6e-35 151.4 88 81.8
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.8e-35 151.0 89 79.8
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.8e-35 151.0 88 80.7
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 4.8e-35 151.0 93 78.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 6.2e-35 150.6 93 76.3
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 6.2e-35 150.6 93 78.5
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 6.2e-35 150.6 90 76.7
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 8.1e-35 150.2 88 81.8
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.1e-34 149.8 88 79.5
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.8e-34 149.1 97 74.2
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.4e-34 148.7 91 76.9
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 2.4e-34 148.7 97 73.2
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 3.1e-34 148.3 90 76.7
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 5.3e-34 147.5 85 80.0
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 5.3e-34 147.5 88 81.8
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 6.9e-34 147.1 92 75.0
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 6.9e-34 147.1 92 75.0
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 6.9e-34 147.1 88 80.7
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 9.0e-34 146.7 92 75.0
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 9.0e-34 146.7 92 75.0
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 9.0e-34 146.7 92 75.0
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 80.7
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 79.5
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 2.0e-33 145.6 90 75.6
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.0e-33 145.6 88 79.5
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.6e-33 145.2 89 77.5
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.6e-33 145.2 103 68.9
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 2.6e-33 145.2 84 82.1
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 3.4e-33 144.8 88 78.4
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 4.5e-33 144.4 92 75.0
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 4.5e-33 144.4 88 78.4
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 4.5e-33 144.4 93 71.0
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 4.5e-33 144.4 88 75.0
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 5.8e-33 144.1 89 76.4
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 5.8e-33 144.1 89 77.5
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 9.9e-33 143.3 93 73.1
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.3e-32 142.9 84 82.1
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 2.2e-32 142.1 89 75.3
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 2.9e-32 141.7 89 75.3
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.9e-32 141.7 87 78.2
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 8.4e-32 140.2 88 76.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.1e-31 139.8 104 65.4
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 1.9e-31 139.0 87 77.0
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 2.1e-30 135.6 126 57.9
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.9e-28 129.0 77 75.3
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 7.4e-28 127.1 69 87.0
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 3.7e-27 124.8 68 88.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.8e-27 124.4 73 78.1
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.4e-26 122.9 77 72.7
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 6.9e-26 120.6 69 78.3
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 9.0e-26 120.2 81 67.9
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 9.0e-26 120.2 81 67.9
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 9.0e-26 120.2 71 78.9
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.6e-25 118.6 67 83.6
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.3e-24 116.3 66 86.4
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 2.9e-24 115.2 141 47.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 8.4e-24 113.6 67 76.1
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 8.4e-24 113.6 67 76.1
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 8.4e-24 113.6 70 72.9
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.9e-23 112.5 70 71.4
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.2e-23 111.7 79 64.6
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 5.5e-23 110.9 69 72.5
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 2.1e-22 109.0 65 78.5
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 4.6e-22 107.8 65 75.4
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.3e-21 105.5 84 59.5
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.3e-19 99.8 77 61.0
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 2.0e-17 92.4 67 71.6
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.3e-16 89.7 65 61.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 4.6e-14 81.3 45 77.8
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.3e-13 79.7 91 50.5
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.4e-10 69.7 71 45.1
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.4e-10 69.7 70 50.0


User provided reference genes

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