Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.8e-139 499.2 246 100.0
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.3e-105 386.7 245 75.5
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.2e-105 386.0 251 74.9
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.9e-105 385.6 264 73.1
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.5e-104 382.5 245 73.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 4.2e-104 381.7 237 76.4
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.0e-102 377.1 245 75.1
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.0e-102 377.1 259 71.8
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.4e-102 376.7 244 75.4
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.8e-102 376.3 275 69.1
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 1.8e-102 376.3 263 72.6
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 1.8e-102 376.3 263 72.6
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.3e-102 375.9 260 73.5
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 8.8e-102 374.0 244 74.2
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.3e-101 372.1 264 71.2
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 5.7e-101 371.3 247 73.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 7.4e-101 370.9 255 71.0
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 7.4e-101 370.9 264 70.8
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 7.4e-101 370.9 259 71.0
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.3e-100 370.2 203 85.2
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.2e-100 369.4 255 71.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 2.2e-100 369.4 260 71.9
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 8.2e-100 367.5 249 70.7
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.4e-99 366.7 262 69.8
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 3.1e-99 365.5 268 69.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.3e-99 364.8 228 75.4
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 5.3e-99 364.8 228 75.4
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 5.3e-99 364.8 245 73.1
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 5.3e-99 364.8 252 71.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 9.1e-99 364.0 200 84.0
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.2e-98 363.6 244 70.9
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.2e-98 363.6 208 82.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.2e-98 363.6 272 68.8
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.0e-98 362.8 266 69.2
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 2.6e-98 362.5 242 72.3
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 3.4e-98 362.1 246 72.0
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 3.4e-98 362.1 200 83.5
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 3.4e-98 362.1 264 69.3
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 4.5e-98 361.7 237 73.0
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 4.5e-98 361.7 196 84.7
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.3e-97 360.1 246 72.8
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 3.8e-97 358.6 241 71.8
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.1e-96 357.1 249 71.1
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.1e-96 357.1 209 80.4
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.9e-96 356.3 208 81.2
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 4.2e-96 355.1 197 83.8
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 5.5e-96 354.8 200 84.5
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 5.5e-96 354.8 200 84.5
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 7.2e-96 354.4 200 82.0
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 2.1e-95 352.8 209 78.9
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.7e-95 352.4 243 70.8
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.6e-95 352.1 200 84.0
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 6.1e-95 351.3 210 80.0
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 7.9e-95 350.9 195 82.6
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.0e-94 350.5 263 65.8
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.0e-94 350.5 249 69.1
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.8e-94 349.7 199 80.4
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.8e-94 349.7 258 66.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 5.1e-94 348.2 248 67.7
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 6.7e-94 347.8 197 79.7
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 8.8e-94 347.4 199 80.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 8.8e-94 347.4 199 79.9
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 8.8e-94 347.4 202 79.7
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 8.8e-94 347.4 199 80.4
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 2.6e-93 345.9 253 68.4
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 2.6e-93 345.9 199 78.9
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 9.7e-93 344.0 238 69.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.7e-92 343.2 200 79.0
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.7e-92 343.2 200 79.0
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.8e-92 342.4 199 79.4
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 3.7e-92 342.0 195 82.1
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.8e-91 339.7 210 78.1
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 4.1e-91 338.6 234 69.7
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 9.1e-91 337.4 224 71.4
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.6e-90 336.7 209 75.1
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.6e-90 336.7 276 65.2
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.0e-90 336.3 203 74.9
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 1.3e-89 333.6 192 79.2
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.2e-87 327.0 235 67.2
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 4.7e-87 325.1 194 77.8
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-85 320.5 230 70.0
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 4.4e-85 318.5 215 70.7
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 5.7e-85 318.2 194 74.7
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 1.3e-84 317.0 221 69.2
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.5e-82 308.9 257 59.9
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.5e-80 302.8 272 58.8
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.6e-79 300.1 167 81.4
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.1e-79 299.7 272 58.1
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.1e-79 299.7 195 72.3
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 8.8e-78 294.3 165 80.6
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 3.4e-77 292.4 246 63.4
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.5e-77 291.2 171 76.6
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.1e-75 285.8 276 55.1
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 9.1e-75 284.3 164 78.0
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-74 282.0 185 69.2
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.0e-73 280.8 212 68.4
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 7.0e-67 258.1 213 62.4
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 6.6e-57 224.9 122 83.6
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 8.6e-57 224.6 152 71.7
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.5e-56 223.8 181 64.6
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 1.2e-53 214.2 240 52.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 7.5e-53 211.5 121 78.5
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 7.8e-50 201.4 172 64.5
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 9.5e-48 194.5 210 51.4
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.1e-46 191.0 260 43.8
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.1e-46 191.0 164 64.0
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.2e-44 183.3 118 77.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.7e-42 176.4 486 31.5
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.2e-39 167.5 91 81.3
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 7.1e-35 151.8 215 44.2
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 3.9e-33 146.0 73 89.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.9e-27 127.1 76 71.1
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 4.2e-27 125.9 68 82.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.1e-14 84.7 96 49.0
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-09 65.1 37 81.1


User provided reference genes

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