Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 3.8e-49 199.1 245 100.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 7.5e-29 131.7 120 60.8
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.4e-27 127.5 122 70.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 7.1e-27 125.2 245 84.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.1e-26 123.6 122 68.0
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 7.8e-26 121.7 119 58.8
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 7.8e-26 121.7 120 68.3
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.3e-25 120.2 124 69.4
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.0e-25 119.8 119 67.2
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.9e-25 119.4 121 59.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.9e-25 119.4 124 69.4
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.9e-25 119.4 122 66.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 8.6e-25 118.2 121 55.4
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 2.5e-24 116.7 146 48.6
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 2.5e-24 116.7 122 65.6
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.3e-24 116.3 109 71.6
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 4.3e-24 115.9 122 55.7
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.3e-24 115.9 109 71.6
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 5.6e-24 115.5 117 55.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.3e-24 115.2 124 54.0
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.2e-23 114.4 107 66.4
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.1e-23 113.6 120 54.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.8e-23 113.2 110 58.2
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 2.8e-23 113.2 122 51.6
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 3.6e-23 112.8 121 64.5
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 4.7e-23 112.5 121 67.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 6.2e-23 112.1 123 66.7
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 6.2e-23 112.1 120 64.2
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.4e-22 110.9 125 65.6
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.4e-22 110.9 116 65.5
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 3.1e-22 109.8 116 57.8
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.1e-22 109.8 116 53.4
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 6.8e-22 108.6 123 65.9
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 8.9e-22 108.2 105 54.3
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 8.9e-22 108.2 112 55.4
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.9e-22 108.2 120 64.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.2e-21 107.8 120 64.2
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.2e-21 107.8 122 62.3
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.2e-21 107.8 117 66.7
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.6e-21 106.7 121 52.9
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.6e-21 106.7 115 50.4
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.6e-21 106.7 115 50.4
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.6e-21 106.7 115 50.4
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.4e-21 106.3 117 67.5
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.4e-21 106.3 108 55.6
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 7.6e-21 105.1 108 54.6
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 7.6e-21 105.1 120 69.2
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 9.9e-21 104.8 123 65.9
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.2e-20 103.6 108 53.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.9e-20 103.2 156 45.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 4.9e-20 102.4 113 67.3
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 6.4e-20 102.1 122 63.9
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.4e-19 100.9 119 52.9
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.9e-19 100.5 123 57.7
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 107 61.7
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.2e-18 97.8 121 62.8
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.2e-18 97.8 115 63.5
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-18 97.4 116 50.9
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.6e-18 97.4 120 65.8
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-18 96.3 92 59.8
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.6e-18 95.9 92 59.8
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.6e-18 95.9 92 59.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 4.6e-18 95.9 122 59.8
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 4.6e-18 95.9 125 60.0
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 6.0e-18 95.5 114 58.8
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 6.0e-18 95.5 115 65.2
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 7.8e-18 95.1 116 62.1
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.0e-17 94.7 111 64.0
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.3e-17 94.4 116 57.8
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.7e-17 94.0 121 62.0
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.3e-17 93.6 92 58.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 3.9e-17 92.8 116 57.8
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 5.1e-17 92.4 105 49.5
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 5.1e-17 92.4 120 60.8
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 6.6e-17 92.0 121 59.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 8.7e-17 91.7 122 57.4
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.1e-16 91.3 116 57.8
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.9e-16 90.5 122 54.9
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.5e-16 90.1 116 57.8
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 3.3e-16 89.7 112 62.5
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.2e-15 87.8 81 58.0
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.2e-15 87.8 113 62.8
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.6e-15 87.4 108 63.0
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.1e-15 87.0 116 46.6
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.1e-15 87.0 106 63.2
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.8e-15 86.7 108 62.0
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 3.6e-15 86.3 111 62.2
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 4.7e-15 85.9 112 58.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 4.7e-15 85.9 114 62.3
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 8.1e-15 85.1 111 61.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.1e-14 83.2 101 56.4
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 9.0e-14 81.6 111 57.7
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 2.6e-13 80.1 107 42.1
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 3.4e-13 79.7 111 60.4
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 3.4e-13 79.7 103 53.4
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 3.4e-13 79.7 77 61.0
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 9.9e-13 78.2 79 55.7
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.3e-12 77.8 92 53.3
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.4e-11 74.3 122 54.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.9e-11 73.9 126 42.9
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 2.4e-11 73.6 118 39.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.2e-11 73.2 99 46.5
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 5.4e-11 72.4 82 48.8
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 9.3e-11 71.6 97 41.2
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 2.1e-10 70.5 91 47.3
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 2.7e-10 70.1 73 47.9
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 2.7e-10 70.1 122 51.6
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 3.9e-09 66.2 101 36.6
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 6.6e-09 65.5 105 37.1
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 8.7e-09 65.1 61 60.7
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.3e-07 61.2 109 33.0
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 4.0e-06 56.2 114 32.5
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 5.3e-06 55.8 141 35.5


User provided reference genes

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