Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0901 Cannabis sativa HOM05D002134 ORTHO05D003893 6.2e-82 307.4 152 100.0
Dinv26817 Davidia involucrata HOM05D002134 ORTHO05D003893 3.2e-22 109.0 80 60.0
Nn5g29546 Nelumbo nucifera HOM05D002134 ORTHO05D003893 5.5e-22 108.2 80 60.0
Peaxi162Scf00515g00222 Petunia axillaris HOM05D002134 ORTHO05D003893 1.6e-21 106.7 82 59.8
TAR381G0714 Trochodendron aralioides HOM05D002134 ORTHO05D003893 1.6e-21 106.7 82 61.0
TAR625G0668 Trochodendron aralioides HOM05D002134 ORTHO05D003893 4.7e-21 105.1 80 58.8
Lj2C449G12 Lonicera japonica HOM05D002134 ORTHO05D003893 6.1e-21 104.8 156 41.7
Duzib251G0511 Durio zibethinus HOM05D002134 ORTHO05D003893 1.8e-20 103.2 165 39.4
Nitab4.5_0001827g0130 Nicotiana tabacum HOM05D002134 ORTHO05D003893 1.8e-20 103.2 148 43.2
QL02p007979 Quercus lobata HOM05D002134 ORTHO05D003893 1.8e-20 103.2 82 57.3
Rhsim08G0113900 Rhododendron simsii HOM05D002134 ORTHO05D003893 4.0e-20 102.1 146 41.1
PSO541G3855 Papaver somniferum HOM05D002134 ORTHO05D003893 5.2e-20 101.7 80 55.0
Atru.chr11.1864 Acer truncatum HOM05D002134 ORTHO05D003893 6.8e-20 101.3 83 53.0
EL10Ac6g14922 Beta vulgaris HOM05D002134 ORTHO05D003893 1.2e-19 100.5 144 42.4
Hund16584 Selenicereus undatus HOM05D002134 ORTHO05D003893 1.2e-19 100.5 80 56.2
MBI16_g35645_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D003893 2.0e-19 99.8 81 56.8
MBI16_g36971_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D003893 2.0e-19 99.8 81 56.8
vmacro17851 Vaccinium macrocarpon HOM05D002134 ORTHO05D003893 2.0e-19 99.8 82 56.1
Carub.0008s0579 Capsella rubella HOM05D002134 ORTHO05D003893 2.6e-19 99.4 83 53.0
Cc10_g03050 Coffea canephora HOM05D002134 ORTHO05D003893 2.6e-19 99.4 80 53.8
PGSC0003DMG400012687 Solanum tuberosum HOM05D002134 ORTHO05D003893 2.6e-19 99.4 80 55.0
Hma1.2p1_0400F.1_g144615 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 4.4e-19 98.6 80 52.5
Sabra02G0199500 Salix brachista HOM05D002134 ORTHO05D003893 4.4e-19 98.6 80 55.0
CSS0042168 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D003893 5.7e-19 98.2 142 41.5
Thhalv10003270m.g Eutrema salsugineum HOM05D002134 ORTHO05D003893 5.7e-19 98.2 145 40.7
BcaC06g31735 Brassica carinata HOM05D002134 ORTHO05D003893 9.8e-19 97.4 145 39.3
Gohir.A05G195200 Gossypium hirsutum HOM05D002134 ORTHO05D003893 9.8e-19 97.4 86 51.2
Manes.18G028300 Manihot esculenta HOM05D002134 ORTHO05D003893 9.8e-19 97.4 80 52.5
CARHR181060 Cardamine hirsuta HOM05D002134 ORTHO05D003893 1.7e-18 96.7 80 52.5
Lsat_1_v5_gn_2_76680 Lactuca sativa HOM05D002134 ORTHO05D003893 1.7e-18 96.7 76 53.9
Sabra14G0141100 Salix brachista HOM05D002134 ORTHO05D003893 1.7e-18 96.7 80 53.8
AT5G42960 Arabidopsis thaliana HOM05D002134 ORTHO05D003893 2.2e-18 96.3 151 38.4
Cpa.g.sc1379.5 Carica papaya HOM05D002134 ORTHO05D003893 2.2e-18 96.3 161 37.3
Cpa.g.sc2093.1 Carica papaya HOM05D002134 ORTHO05D003893 2.2e-18 96.3 161 37.3
Thecc.02G232300 Theobroma cacao HOM05D002134 ORTHO05D003893 2.2e-18 96.3 165 37.0
BcaC03g16545 Brassica carinata HOM05D002134 ORTHO05D003893 2.8e-18 95.9 145 39.3
C02p43630 Brassica napus HOM05D002134 ORTHO05D003893 2.8e-18 95.9 145 39.3
Potri.002G262700 Populus trichocarpa HOM05D002134 ORTHO05D003893 2.8e-18 95.9 80 53.8
Aa31LG9G13080 Aethionema arabicum HOM05D002134 ORTHO05D003893 3.7e-18 95.5 80 52.5
Aqoxy6G01056 Aquilegia oxysepala HOM05D002134 ORTHO05D003893 3.7e-18 95.5 80 53.8
AL8G17810 Arabidopsis lyrata HOM05D002134 ORTHO05D003893 3.7e-18 95.5 145 38.6
A02p27600 Brassica napus HOM05D002134 ORTHO05D003893 3.7e-18 95.5 145 39.3
BraA02t07793Z Brassica rapa HOM05D002134 ORTHO05D003893 3.7e-18 95.5 145 39.3
Gohir.D05G198400 Gossypium hirsutum HOM05D002134 ORTHO05D003893 3.7e-18 95.5 86 50.0
TWI36G0543 Tripterygium wilfordii HOM05D002134 ORTHO05D003893 3.7e-18 95.5 82 50.0
Potri.014G181000 Populus trichocarpa HOM05D002134 ORTHO05D003893 4.9e-18 95.1 80 52.5
arahy.Tifrunner.gnm1.ann1.19G7CF Arachis hypogaea HOM05D002134 ORTHO05D003893 6.3e-18 94.7 80 53.8
arahy.Tifrunner.gnm1.ann1.F0DT7Y Arachis hypogaea HOM05D002134 ORTHO05D003893 6.3e-18 94.7 80 53.8
CANSAT25G1534 Cannabis sativa HOM05D002134 ORTHO05D003893 6.3e-18 94.7 80 48.8
Gorai.009G203500 Gossypium raimondii HOM05D002134 ORTHO05D003893 6.3e-18 94.7 80 52.5
Nitab4.5_0000790g0140 Nicotiana tabacum HOM05D002134 ORTHO05D003893 6.3e-18 94.7 80 55.0
BcaC02g10786 Brassica carinata HOM05D002134 ORTHO05D003893 8.3e-18 94.4 145 39.3
C04p25100 Brassica napus HOM05D002134 ORTHO05D003893 8.3e-18 94.4 145 39.3
BolC4t24014H Brassica oleracea HOM05D002134 ORTHO05D003893 8.3e-18 94.4 145 39.3
Duzib116G0461 Durio zibethinus HOM05D002134 ORTHO05D003893 8.3e-18 94.4 86 50.0
AL1G52820 Arabidopsis lyrata HOM05D002134 ORTHO05D003893 1.1e-17 94.0 157 35.7
A06p48130 Brassica napus HOM05D002134 ORTHO05D003893 1.1e-17 94.0 145 37.9
BolC2t10405H Brassica oleracea HOM05D002134 ORTHO05D003893 1.1e-17 94.0 145 38.6
BraA06t27682Z Brassica rapa HOM05D002134 ORTHO05D003893 1.1e-17 94.0 145 37.9
COL.COLO4_34958 Corchorus olitorius HOM05D000836 ORTHO05D000709 1.1e-17 94.0 80 53.8
COL.COLO4_26339 Corchorus olitorius HOM05D002134 ORTHO05D003893 1.4e-17 93.6 134 41.8
Sp2g07710 Schrenkiella parvula HOM05D002134 ORTHO05D003893 1.4e-17 93.6 145 38.6
Carub.0001s3559 Capsella rubella HOM05D002134 ORTHO05D003893 1.8e-17 93.2 166 36.7
Gohir.A05G321300 Gossypium hirsutum HOM05D002134 ORTHO05D003893 1.8e-17 93.2 165 37.0
Lj5g0004004 Lotus japonicus HOM05D002134 ORTHO05D003893 1.8e-17 93.2 80 52.5
Nitab4.5_0002296g0030 Nicotiana tabacum HOM05D002134 ORTHO05D003893 1.8e-17 93.2 80 53.8
Gohir.A03G078300 Gossypium hirsutum HOM05D002134 ORTHO05D003893 2.4e-17 92.8 86 46.5
Gohir.D05G323500 Gossypium hirsutum HOM05D002134 ORTHO05D003893 2.4e-17 92.8 165 36.4
Manes.05G161500 Manihot esculenta HOM05D002134 ORTHO05D003893 2.4e-17 92.8 80 50.0
Solyc12g089100.2 Solanum lycopersicum HOM05D002134 ORTHO05D003893 2.4e-17 92.8 80 52.5
Duzib093G1509 Durio zibethinus HOM05D002134 ORTHO05D003893 3.1e-17 92.4 86 48.8
Glyma.09G114000 Glycine max HOM05D002134 ORTHO05D003893 3.1e-17 92.4 83 50.6
Glyma.14G076000 Glycine max HOM05D002134 ORTHO05D003893 3.1e-17 92.4 83 50.6
ClCG05G019120 Citrullus lanatus HOM05D002134 ORTHO05D003893 4.1e-17 92.0 142 38.7
Gohir.D02G094400 Gossypium hirsutum HOM05D002134 ORTHO05D003893 4.1e-17 92.0 86 46.5
PSO528G0218 Papaver somniferum HOM05D002134 ORTHO05D003893 4.1e-17 92.0 82 46.3
Sopen12g030980 Solanum pennellii HOM05D002134 ORTHO05D003893 4.1e-17 92.0 80 52.5
PGSC0003DMG401015455 Solanum tuberosum HOM05D002134 ORTHO05D003893 4.1e-17 92.0 80 52.5
Thecc.08G024600 Theobroma cacao HOM05D002134 ORTHO05D003893 4.1e-17 92.0 86 47.7
Atru.chr13.505 Acer truncatum HOM05D002134 ORTHO05D003893 5.4e-17 91.7 77 51.9
AT1G45170 Arabidopsis thaliana HOM05D002134 ORTHO05D003893 5.4e-17 91.7 157 35.0
CiPaw.16G055600 Carya illinoinensis HOM05D002134 ORTHO05D003893 5.4e-17 91.7 80 48.8
Gorai.005G107300 Gossypium raimondii HOM05D002134 ORTHO05D003893 5.4e-17 91.7 86 46.5
Lj4A785T30 Lonicera japonica HOM05D002134 ORTHO05D003893 5.4e-17 91.7 80 50.0
Nitab4.5_0000110g0550 Nicotiana tabacum HOM05D002134 ORTHO05D003893 5.4e-17 91.7 80 51.2
Sopen04g033780 Solanum pennellii HOM05D002134 ORTHO05D003893 5.4e-17 91.7 80 51.2
BcaB07g30598 Brassica carinata HOM05D002134 ORTHO05D003893 7.0e-17 91.3 145 37.9
CSS0002761 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D003893 7.0e-17 91.3 80 51.2
CAN.G1126.43 Capsicum annuum HOM05D002134 ORTHO05D003893 7.0e-17 91.3 80 50.0
Hma1.2p1_0203F.1_g086480 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 7.0e-17 91.3 80 51.2
Peaxi162Scf00690g00121 Petunia axillaris HOM05D002134 ORTHO05D003893 7.0e-17 91.3 80 51.2
Cpa.g.sc64.75 Carica papaya HOM05D002134 ORTHO05D003893 9.2e-17 90.9 81 48.1
CDE01G0655 Ceratophyllum demersum HOM05D002134 ORTHO05D003893 9.2e-17 90.9 83 50.6
Ciclev10002450m.g Citrus clementina HOM05D002134 ORTHO05D003893 9.2e-17 90.9 80 52.5
Cc07_g09280 Coffea canephora HOM05D002134 ORTHO05D003893 9.2e-17 90.9 81 54.3
PSO170G0091 Papaver somniferum HOM05D002134 ORTHO05D003893 9.2e-17 90.9 82 45.1
Gorai.009G347200 Gossypium raimondii HOM05D002134 ORTHO05D003893 1.2e-16 90.5 165 35.8
PGR031G0525 Punica granatum HOM05D002134 ORTHO05D003893 1.2e-16 90.5 79 50.6
CiPaw.01G035500 Carya illinoinensis HOM05D002134 ORTHO05D003893 1.6e-16 90.1 87 49.4
ECA238G4749 Erigeron canadensis HOM05D002134 ORTHO05D003893 1.6e-16 90.1 89 46.1
GSVIVG01009688001 Vitis vinifera HOM05D002134 ORTHO05D003893 1.6e-16 90.1 81 50.6
Solyc04g080190.3 Solanum lycopersicum HOM05D002134 ORTHO05D003893 2.0e-16 89.7 80 50.0
PGSC0003DMG400005143 Solanum tuberosum HOM05D002134 ORTHO05D003893 2.0e-16 89.7 80 50.0
CAN.G1139.10 Capsicum annuum HOM05D002134 ORTHO05D003893 2.7e-16 89.4 80 52.5
CDE02G2135 Ceratophyllum demersum HOM05D002134 ORTHO05D003893 2.7e-16 89.4 83 50.6
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 2.7e-16 89.4 80 50.0
FvH4_2g39980 Fragaria vesca HOM05D002134 ORTHO05D003893 2.7e-16 89.4 80 50.0
QL06p045526 Quercus lobata HOM05D002134 ORTHO05D003893 2.7e-16 89.4 84 53.6
Sed0018900 Sechium edule HOM05D002134 ORTHO05D003893 2.7e-16 89.4 145 37.9
THA.LOC104822842 Tarenaya hassleriana HOM05D002134 ORTHO05D003893 2.7e-16 89.4 161 35.4
CiPaw.15G075900 Carya illinoinensis HOM05D002134 ORTHO05D003893 3.5e-16 89.0 80 48.8
Nitab4.5_0003783g0010 Nicotiana tabacum HOM05D002134 ORTHO05D003893 3.5e-16 89.0 80 50.0
Cfa018139 Carpinus fangiana HOM05D002134 ORTHO05D003893 5.9e-16 88.2 80 48.8
ECA247G1990 Erigeron canadensis HOM05D002134 ORTHO05D003893 5.9e-16 88.2 80 46.2
Lalb_Chr24g0399021 Lupinus albus HOM05D002134 ORTHO05D003893 5.9e-16 88.2 80 50.0
Medtr1g022050 Medicago truncatula HOM05D002134 ORTHO05D003893 5.9e-16 88.2 87 48.3
Actinidia19173 Actinidia chinensis HOM05D002134 ORTHO05D003893 7.8e-16 87.8 78 51.3
Actinidia22557 Actinidia chinensis HOM05D002134 ORTHO05D003893 7.8e-16 87.8 80 47.5
Ca_13347_v3 Cicer arietinum L. HOM05D002134 ORTHO05D003893 7.8e-16 87.8 87 49.4
THA.LOC104814160 Tarenaya hassleriana HOM05D002134 ORTHO05D003893 7.8e-16 87.8 82 47.6
EL10Ac1g01799 Beta vulgaris HOM05D002134 ORTHO05D003893 1.0e-15 87.4 80 52.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.0e-15 87.4 80 48.8
FAN27G0841 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.0e-15 87.4 80 48.8
TPR.G29753 Trifolium pratense HOM05D002134 ORTHO05D003893 1.0e-15 87.4 82 50.0
CARHR036260 Cardamine hirsuta HOM05D002134 ORTHO05D003893 1.3e-15 87.0 154 34.4
MELO3C003853.2 Cucumis melo HOM05D002134 ORTHO05D003893 1.3e-15 87.0 142 38.0
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.3e-15 87.0 80 48.8
Sc15g0006880 Simmondsia chinensis HOM05D002134 ORTHO05D003893 1.3e-15 87.0 79 53.2
VMungo0647G1701 Vigna mungo HOM05D002134 ORTHO05D003893 1.3e-15 87.0 80 47.5
Oeu002842.1 Olea europaea HOM05D002134 ORTHO05D003893 1.7e-15 86.7 80 47.5
HanXRQChr05g0139211 Helianthus annuus HOM05D002134 ORTHO05D003893 2.3e-15 86.3 80 46.2
CsaV3_3G045020 Cucumis sativus L. HOM05D002134 ORTHO05D003893 2.9e-15 85.9 142 37.3
Eucgr.F01905 Eucalyptus grandis HOM05D002134 ORTHO05D003893 2.9e-15 85.9 80 48.8
HanXRQChr02g0042031 Helianthus annuus HOM05D002134 ORTHO05D003893 2.9e-15 85.9 80 46.2
Actinidia15314 Actinidia chinensis HOM05D000207 ORTHO05D001482 3.8e-15 85.5 80 47.5
Lsat_1_v5_gn_1_17601 Lactuca sativa HOM05D002134 ORTHO05D003893 3.8e-15 85.5 80 48.8
Prupe.1G381300 Prunus persica HOM05D002134 ORTHO05D003893 3.8e-15 85.5 80 48.8
RcHm_v2.0_Chr6g0300771 Rosa chinensis HOM05D002134 ORTHO05D003893 3.8e-15 85.5 80 46.2
Hma1.2p1_0023F.1_g014890 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 5.0e-15 85.1 80 46.2
Lalb_Chr22g0355501 Lupinus albus HOM05D002134 ORTHO05D003893 5.0e-15 85.1 80 50.0
MD15G1030300 Malus domestica HOM05D002134 ORTHO05D003893 5.0e-15 85.1 82 48.8
Phvul.001G015300 Phaseolus vulgaris HOM05D002134 ORTHO05D003893 5.0e-15 85.1 80 47.5
Rhsim06G0034800 Rhododendron simsii HOM05D002134 ORTHO05D003893 5.0e-15 85.1 80 50.0
Hund17648 Selenicereus undatus HOM05D002134 ORTHO05D003893 5.0e-15 85.1 80 48.8
MSTRG.25160 Avicennia marina HOM05D002134 ORTHO05D003893 6.6e-15 84.7 80 46.2
Ciclev10032759m.g Citrus clementina HOM05D002134 ORTHO05D003893 6.6e-15 84.7 156 35.9
DCAR_019525 Daucus carota HOM05D002134 ORTHO05D003893 6.6e-15 84.7 80 46.2
Lalb_Chr14g0369171 Lupinus albus HOM05D002134 ORTHO05D003893 6.6e-15 84.7 80 51.2
AUR62003177 Chenopodium quinoa HOM05D002134 ORTHO05D003893 8.6e-15 84.3 81 51.9
Migut.C00709 Erythranthe guttata HOM05D002134 ORTHO05D003893 8.6e-15 84.3 79 48.1
AUR62038823 Chenopodium quinoa HOM05D002134 ORTHO05D003893 1.1e-14 84.0 80 47.5
Manes.01G191700 Manihot esculenta HOM05D002134 ORTHO05D003893 1.1e-14 84.0 87 46.0
Peaxi162Scf00064g00434 Petunia axillaris HOM05D002134 ORTHO05D003893 1.5e-14 83.6 80 47.5
SGA_v2.0_scaffold48G18076 Striga asiatica HOM05D003992 ORTHO05D004329 1.5e-14 83.6 80 47.5
HanXRQChr14g0440381 Helianthus annuus HOM05D002134 ORTHO05D003893 1.9e-14 83.2 85 47.1
SalBow7G2089 Salvia bowleyana HOM05D002134 ORTHO05D003893 1.9e-14 83.2 80 46.2
MD08G1033600 Malus domestica HOM05D002134 ORTHO05D003893 2.5e-14 82.8 86 45.3
Duzib041G0269 Durio zibethinus HOM05D002134 ORTHO05D003893 3.3e-14 82.4 76 47.4
Psat6g006400 Pisum sativum HOM05D002134 ORTHO05D003893 3.3e-14 82.4 87 47.1
vmacro21629 Vaccinium macrocarpon HOM05D002134 ORTHO05D003893 3.3e-14 82.4 80 45.0
Dinv36066 Davidia involucrata HOM05D002134 ORTHO05D003893 4.3e-14 82.0 80 47.5
Gohir.A06G010800 Gossypium hirsutum HOM05D002134 ORTHO05D003893 4.3e-14 82.0 86 41.9
Gorai.010G010900 Gossypium raimondii HOM05D002134 ORTHO05D003893 4.3e-14 82.0 86 41.9
Gohir.D06G008200 Gossypium hirsutum HOM05D002134 ORTHO05D003893 7.3e-14 81.3 86 41.9
Oeu009869.1 Olea europaea HOM05D002134 ORTHO05D003893 7.3e-14 81.3 80 43.8
Hma1.2p1_0469F.1_g159180 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 9.5e-14 80.9 159 32.7
AUR62007996 Chenopodium quinoa HOM05D002134 ORTHO05D003893 1.2e-13 80.5 81 50.6
DCAR_020967 Daucus carota HOM05D002134 ORTHO05D003893 1.2e-13 80.5 85 44.7
DCAR_020968 Daucus carota HOM05D002134 ORTHO05D003893 1.2e-13 80.5 85 44.7
SEGI_08825 Sequoiadendron giganteum HOM05D002134 ORTHO05D003893 1.2e-13 80.5 80 46.2
Ah.03g139430 Amaranthus hybridus HOM05D002134 ORTHO05D003893 1.6e-13 80.1 83 49.4
Gohir.D05G261800 Gossypium hirsutum HOM05D002134 ORTHO05D003893 4.7e-13 78.6 78 42.3
HanXRQChr05g0139201 Helianthus annuus HOM05D002134 ORTHO05D003893 4.7e-13 78.6 72 47.2
PGR083G0986 Punica granatum HOM05D002134 ORTHO05D003893 4.7e-13 78.6 82 42.7
HPP92_007892 Vanilla planifolia HOM05D002134 ORTHO05D003893 1.0e-12 77.4 85 42.4
DCAR_017249 Daucus carota HOM05D002134 ORTHO05D003893 1.8e-12 76.6 83 43.4
Gorai.009G273700 Gossypium raimondii HOM05D002134 ORTHO05D003893 2.3e-12 76.3 114 35.1
HPP92_007877 Vanilla planifolia HOM05D002134 ORTHO05D003893 2.3e-12 76.3 85 41.2
Gohir.A05G259900 Gossypium hirsutum HOM05D002134 ORTHO05D003893 4.4e-11 72.0 78 38.5
Thhalv10012286m.g Eutrema salsugineum HOM05D002134 ORTHO05D003893 5.7e-11 71.6 67 50.7
unitig_26.g9707 Utricularia gibba HOM05D002134 ORTHO05D003893 3.7e-10 68.9 78 39.7
TAR636G1385 Trochodendron aralioides HOM05D002134 ORTHO05D003893 3.2e-09 65.9 44 61.4
Mapoly0013s0017 Marchantia polymorpha HOM05D002134 ORTHO05D003893 6.6e-07 58.2 84 36.9


User provided reference genes

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