Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 1.6e-104 382.9 210 100.0
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 2.1e-56 223.0 209 61.2
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 3.6e-56 222.2 215 58.1
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 4.8e-56 221.9 210 60.0
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 3.1e-55 219.2 213 58.2
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 5.3e-55 218.4 213 59.6
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 6.9e-55 218.0 217 58.5
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 6.9e-55 218.0 210 58.6
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 1.2e-54 217.2 208 60.1
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 1.5e-54 216.9 210 58.6
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 3.4e-54 215.7 214 56.5
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 5.8e-54 214.9 214 56.5
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.3e-53 213.8 219 56.6
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.3e-53 213.8 219 55.7
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 1.7e-53 213.4 219 56.2
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 3.8e-53 212.2 219 56.2
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 1.4e-52 210.3 204 57.8
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 1.9e-52 209.9 222 53.6
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 5.4e-52 208.4 223 57.4
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 1.2e-51 207.2 210 58.1
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 1.6e-51 206.8 212 54.7
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 1.6e-51 206.8 213 56.3
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 3.5e-51 205.7 208 57.7
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 4.6e-51 205.3 232 53.9
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 4.6e-51 205.3 212 55.2
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 6.0e-51 204.9 211 56.9
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 2.3e-50 203.0 200 57.0
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 3.0e-50 202.6 212 58.0
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 3.0e-50 202.6 212 55.7
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 8.7e-50 201.1 215 52.6
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 1.1e-49 200.7 204 57.8
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 1.5e-49 200.3 209 56.0
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 5.6e-49 198.4 209 56.9
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 7.3e-49 198.0 219 50.2
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 9.6e-49 197.6 207 55.6
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 9.6e-49 197.6 210 53.8
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 1.6e-48 196.8 209 55.5
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 1.6e-48 196.8 219 53.4
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 3.6e-48 195.7 200 53.0
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 3.6e-48 195.7 210 53.8
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 6.2e-48 194.9 205 54.1
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 1.4e-47 193.7 215 54.4
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 1.8e-47 193.4 205 53.2
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 2.4e-47 193.0 226 51.3
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 4.0e-47 192.2 149 67.1
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 5.3e-47 191.8 205 52.2
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 9.0e-47 191.0 205 51.7
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 5.8e-46 188.3 139 69.1
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 5.8e-46 188.3 218 50.5
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 7.6e-46 188.0 201 52.7
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 7.6e-46 188.0 201 52.2
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 9.9e-46 187.6 203 51.2
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 6.4e-45 184.9 204 54.4
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 1.4e-44 183.7 228 49.1
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 2.4e-44 183.0 235 48.5
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 5.4e-44 181.8 207 49.8
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 7.1e-44 181.4 218 49.5
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 7.1e-44 181.4 227 50.2
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 1.6e-43 180.3 216 49.5
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 2.7e-43 179.5 214 49.1
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 6.0e-43 178.3 248 46.4
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 7.9e-43 177.9 248 44.0
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 1.8e-42 176.8 187 52.9
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 2.3e-42 176.4 202 49.5
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 2.3e-42 176.4 235 47.2
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 5.1e-42 175.3 203 52.2
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 6.7e-42 174.9 232 45.7
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 6.7e-42 174.9 282 42.6
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 1.1e-41 174.1 214 49.1
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 1.1e-41 174.1 200 51.0
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 3.3e-41 172.6 223 46.6
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 3.3e-41 172.6 197 49.2
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 5.6e-41 171.8 218 47.2
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 6.2e-40 168.3 178 55.6
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 4.0e-39 165.6 188 51.1
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 5.3e-39 165.2 202 51.0
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 1.2e-38 164.1 224 45.5
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 2.0e-38 163.3 237 41.8
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 1.7e-37 160.2 207 45.9
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 3.8e-37 159.1 211 48.3
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 3.8e-37 159.1 210 46.7
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 1.1e-36 157.5 201 45.3
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 1.1e-36 157.5 201 45.3
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 1.4e-36 157.1 206 47.1
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 3.2e-36 156.0 205 46.3
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 9.3e-36 154.5 130 60.8
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 1.2e-35 154.1 215 47.0
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 1.6e-35 153.7 205 46.3
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 1.1e-33 147.5 211 42.7
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 1.2e-30 137.5 220 41.8
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 5.8e-30 135.2 203 42.4
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 8.4e-29 131.3 216 38.4
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 9.3e-28 127.9 206 42.7
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.6e-27 127.1 123 55.3
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 8.7e-26 121.3 112 54.5
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 1.1e-25 120.9 211 41.7
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 9.7e-25 117.9 202 40.1
SGA_v2.0_scaffold52G18911 Striga asiatica HOM05D006959 ORTHO05D008808 1.3e-24 117.5 127 55.9
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 6.3e-24 115.2 145 49.0
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 1.0e-21 107.8 72 70.8
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 3.8e-21 105.9 87 58.6
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.7e-16 90.5 129 46.5
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 6.3e-16 88.6 81 53.1
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 5.3e-15 85.5 120 47.5
Cre12.g510034 Chlamydomonas reinhardtii HOM05D006959 ORTHO05D008808 1.9e-12 77.0 138 37.7
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 2.1e-11 73.6 49 69.4
FAN27G2285 Fragaria x ananassa HOM05D006959 ORTHO05D008808 4.7e-11 72.4 104 42.3
FAN24G1784 Fragaria x ananassa HOM05D006959 ORTHO05D008808 6.1e-11 72.0 47 63.8
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 3.0e-10 69.7 68 47.1
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 5.1e-10 68.9 68 45.6
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 3.5e-06 56.2 137 28.5
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 4.5e-06 55.8 139 27.3
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 4.5e-06 55.8 139 27.3
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 5.9e-06 55.5 139 27.3
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 5.9e-06 55.5 139 27.3


User provided reference genes

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