Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 1.3e-85 319.7 163 100.0
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 2.7e-38 162.5 166 53.6
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 2.9e-37 159.1 169 52.7
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 3.8e-37 158.7 185 46.5
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 1.1e-36 157.1 166 49.4
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.9e-36 156.4 168 50.0
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 4.2e-36 155.2 164 50.0
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 9.4e-36 154.1 165 49.7
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 8.0e-35 151.0 167 51.5
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 2.3e-34 149.4 166 49.4
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 2.3e-34 149.4 163 48.5
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 4.0e-34 148.7 166 49.4
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 4.0e-34 148.7 179 48.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 8.8e-34 147.5 167 46.1
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 1.2e-33 147.1 165 48.5
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 2.6e-33 146.0 165 47.3
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 2.6e-33 146.0 167 47.9
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 3.4e-33 145.6 168 48.2
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 3.4e-33 145.6 167 44.3
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 9.8e-33 144.1 166 46.4
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 1.3e-32 143.7 166 47.6
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 4.8e-32 141.7 167 46.1
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 4.8e-32 141.7 167 46.1
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 6.3e-32 141.4 166 48.2
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 6.3e-32 141.4 167 47.9
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 6.3e-32 141.4 188 46.3
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 6.3e-32 141.4 166 47.6
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 6.3e-32 141.4 165 46.7
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 1.1e-31 140.6 167 45.5
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 1.1e-31 140.6 167 45.5
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 1.1e-31 140.6 167 45.5
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.4e-31 140.2 167 45.5
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 1.4e-31 140.2 167 46.1
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 1.4e-31 140.2 145 50.3
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 1.4e-31 140.2 167 44.9
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.4e-31 140.2 167 44.9
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 1.8e-31 139.8 165 46.7
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 2.4e-31 139.4 165 46.1
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 4.1e-31 138.7 163 45.4
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 5.4e-31 138.3 168 45.2
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 5.4e-31 138.3 189 44.4
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 5.4e-31 138.3 163 48.5
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 5.4e-31 138.3 163 48.5
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 7.0e-31 137.9 165 47.9
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 7.0e-31 137.9 141 51.8
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 9.1e-31 137.5 167 49.1
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 9.1e-31 137.5 189 45.0
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 9.1e-31 137.5 170 47.6
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 9.1e-31 137.5 169 42.6
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 1.6e-30 136.7 153 46.4
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 1.6e-30 136.7 167 44.3
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 1.6e-30 136.7 167 47.9
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.7e-30 136.0 170 45.9
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 2.7e-30 136.0 143 49.7
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 1.7e-29 133.3 164 46.3
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.7e-29 133.3 163 44.2
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.3e-29 132.9 165 46.1
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 5.0e-29 131.7 163 45.4
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 8.6e-29 131.0 166 47.0
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 1.9e-28 129.8 170 44.7
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 1.9e-28 129.8 164 43.9
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 2.5e-28 129.4 166 43.4
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 3.3e-28 129.0 167 44.9
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 5.5e-28 128.3 163 42.9
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 5.5e-28 128.3 164 44.5
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 7.2e-28 127.9 163 45.4
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 7.2e-28 127.9 163 46.0
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 9.5e-28 127.5 190 42.1
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 9.5e-28 127.5 158 46.8
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 1.2e-27 127.1 164 45.7
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 2.1e-27 126.3 163 43.6
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 2.1e-27 126.3 163 45.4
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 6.1e-27 124.8 163 43.6
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 1.8e-26 123.2 152 44.7
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 5.2e-26 121.7 168 43.5
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 6.8e-26 121.3 167 44.9
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 7.0e-23 111.3 136 44.1
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.6e-22 110.2 155 42.6
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 2.3e-21 106.3 138 42.8
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 2.9e-21 105.9 173 37.6
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.0e-18 97.4 114 47.4
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 1.8e-18 96.7 165 36.4
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 3.1e-18 95.9 112 46.4
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 6.8e-18 94.7 76 61.8
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 8.9e-18 94.4 81 56.8
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 2.0e-17 93.2 163 36.8
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 7.0e-15 84.7 158 38.0
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 7.0e-15 84.7 85 48.2
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 2.7e-14 82.8 71 57.7
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 3.5e-14 82.4 101 44.6
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 4.6e-14 82.0 88 47.7
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.5e-12 77.0 78 48.7
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 1.9e-12 76.6 57 66.7
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 2.5e-12 76.3 182 31.3
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.1e-07 60.8 97 40.2
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.1e-07 60.8 97 40.2


User provided reference genes

Program Settings