Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.9e-290 1001.1 495 100.0
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.5e-148 530.4 465 55.7
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.5e-145 520.4 465 55.9
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 4.1e-143 512.3 471 54.6
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 9.2e-143 511.1 462 55.0
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.7e-141 506.9 468 54.9
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 3.9e-141 505.8 489 54.2
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 3.9e-141 505.8 464 54.5
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.4e-138 497.3 478 52.5
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 1.8e-138 496.9 468 53.2
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.2e-137 494.2 470 55.1
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 2.0e-137 493.4 461 54.0
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 2.0e-137 493.4 472 54.2
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 2.9e-136 489.6 469 53.3
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 2.9e-136 489.6 466 52.8
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 4.9e-136 488.8 469 53.7
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.9e-135 486.9 461 52.7
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 2.4e-135 486.5 471 51.8
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 6.0e-134 481.9 452 54.9
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.7e-133 480.3 468 51.5
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.6e-132 474.6 464 53.2
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.3e-131 474.2 467 53.1
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.1e-131 473.4 472 51.3
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 4.8e-131 472.2 485 51.3
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 8.1e-131 471.5 467 52.0
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 9.9e-129 464.5 467 52.5
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 6.4e-128 461.8 466 49.8
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.4e-127 460.7 466 49.6
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 7.1e-127 458.4 512 48.4
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 2.7e-126 456.4 482 47.9
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 3.5e-126 456.1 476 50.6
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 5.1e-125 452.2 490 49.4
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 6.7e-125 451.8 470 51.3
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.1e-124 451.1 538 46.8
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 1.5e-124 450.7 466 49.6
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.5e-124 450.7 493 50.5
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 2.5e-124 449.9 471 50.3
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 5.6e-124 448.7 471 50.7
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.3e-123 447.6 471 51.0
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 1.3e-123 447.6 486 47.9
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.6e-123 447.2 474 49.2
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.1e-123 446.8 493 50.3
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 2.8e-123 446.4 477 48.8
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.4e-122 443.4 480 48.3
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 5.3e-122 442.2 468 48.9
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 5.8e-121 438.7 437 53.1
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 8.4e-120 434.9 484 47.9
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.1e-119 434.5 565 44.4
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 7.1e-119 431.8 459 48.6
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 6.7e-117 425.2 466 49.6
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 6.7e-117 425.2 470 50.0
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 2.5e-116 423.3 458 47.2
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.3e-115 421.0 481 47.6
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 2.1e-115 420.2 468 48.5
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.1e-114 417.9 469 49.0
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.4e-114 417.5 477 47.4
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 2.4e-114 416.8 476 46.0
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 2.0e-113 413.7 467 47.1
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.3e-112 411.0 475 46.5
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.9e-112 409.8 399 53.1
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 8.4e-112 408.3 558 41.8
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 3.2e-111 406.4 468 47.0
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 2.1e-110 403.7 351 57.8
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 2.1e-110 403.7 468 46.8
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.1e-110 403.7 468 46.8
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 7.9e-110 401.7 468 47.0
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 9.0e-106 388.3 495 45.9
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 2.6e-105 386.7 468 44.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.6e-102 377.5 477 42.8
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.1e-102 377.1 463 44.3
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.1e-102 375.6 463 44.1
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 5.1e-101 372.5 473 42.7
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 1.7e-99 367.5 470 44.0
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.4e-98 363.6 475 42.7
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 6.9e-98 362.1 343 57.1
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 1.7e-96 357.5 367 52.0
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 2.2e-96 357.1 427 44.5
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 6.5e-96 355.5 521 41.5
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 5.5e-95 352.4 339 55.2
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 4.7e-94 349.4 471 43.3
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 5.1e-93 345.9 475 42.1
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 2.6e-92 343.6 400 45.0
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.6e-81 307.0 309 53.1
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 2.5e-79 300.4 484 37.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 4.1e-74 283.1 539 36.2
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 1.6e-73 281.2 346 46.2
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 5.0e-72 276.2 471 35.9
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 9.1e-66 255.4 270 51.1
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 7.7e-65 252.3 428 36.2
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 3.2e-50 203.8 192 52.6
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 4.1e-42 176.8 184 50.0
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 5.6e-39 166.4 246 40.2
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 1.4e-26 125.2 179 44.1
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 1.9e-26 124.8 137 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 7.8e-25 119.4 182 32.4
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 2.6e-20 104.4 118 40.7
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 3.8e-19 100.5 101 50.5
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 8.4e-19 99.4 113 41.6
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.6e-17 95.1 111 41.4
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.5e-15 88.6 111 45.0
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.6e-15 85.9 68 63.2
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 6.2e-14 83.2 130 38.5
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 9.0e-13 79.3 65 55.4
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 5.8e-12 76.6 74 51.4
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.4e-10 72.0 72 41.7
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 4.2e-10 70.5 302 26.5
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 5.4e-10 70.1 83 42.2
SGA_v2.0_scaffold148G36399 Striga asiatica HOM05D005508 ORTHO05D006882 1.6e-09 68.6 310 23.9
TWI32G0965 Tripterygium wilfordii HOM05D005508 ORTHO05D006882 3.5e-09 67.4 313 24.3
DCAR_011042 Daucus carota HOM05D005508 ORTHO05D006882 1.1e-07 62.4 313 23.3
GSVIVG01008260001 Vitis vinifera HOM05D003769 ORTHO05D004521 1.1e-07 62.4 280 28.6
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.5e-07 62.0 51 49.0
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 7.4e-07 59.7 88 34.1
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 7.4e-07 59.7 88 34.1
Mapoly0155s0010 Marchantia polymorpha HOM05D004758 ORTHO05D006063 3.7e-06 57.4 148 28.4
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 8.1e-06 56.2 198 25.8


User provided reference genes

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