Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-171 606.3 286 100.0
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-128 463.0 239 91.6
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 9.2e-111 404.1 201 92.5
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 6.2e-91 338.2 284 54.2
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-86 323.9 284 53.2
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-69 265.8 142 90.8
CANSAT01G2382 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-68 264.2 128 93.0
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-65 254.2 214 54.2
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 7.9e-62 241.5 283 39.9
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-60 237.3 215 52.1
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 6.3e-59 231.9 283 39.6
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 5.5e-55 218.8 283 37.8
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 4.8e-51 205.7 296 35.8
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-50 203.8 112 88.4
CANSAT35G1117 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-49 200.7 96 92.7
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-43 180.6 222 37.4
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-41 173.7 146 56.2
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 7.7e-41 171.8 211 37.0
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-37 161.0 154 50.0
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-37 160.2 211 35.1
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 5.2e-37 159.1 194 36.6
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-36 156.4 211 37.0
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 7.4e-36 155.2 179 38.5
CANSAT54G1975 Cannabis sativa HOM05D008058 ORTHO05D010564 4.1e-34 149.4 108 57.4
CANSAT21G2068 Cannabis sativa HOM05D008058 ORTHO05D010564 5.3e-34 149.1 108 56.5
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-33 146.7 143 51.7
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-33 146.7 179 36.3
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-30 137.9 204 32.8
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 5.2e-29 132.5 173 35.8
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-28 130.6 195 33.8
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 7.5e-28 128.6 183 31.7
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-27 127.9 183 36.6
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 8.2e-27 125.2 149 39.6
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-25 119.8 150 36.0
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 4.5e-25 119.4 200 30.0
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 6.1e-22 109.0 137 36.5
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 1.0e-21 108.2 150 34.0
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-21 107.1 120 37.5
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 6.8e-21 105.5 260 22.7
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 8.8e-21 105.1 114 38.6
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-20 104.8 132 34.1
CANSAT56G1915 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-20 103.6 52 84.6
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 5.7e-20 102.4 129 36.4
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-19 100.9 120 37.5
CANSAT78G1561 Cannabis sativa HOM05D008058 ORTHO05D010564 8.3e-19 98.6 145 34.5
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 1.4e-18 97.8 128 36.7
CANSAT64G2753 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-18 97.4 138 37.0
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 5.4e-18 95.9 233 24.0
CANSAT21G1517 Cannabis sativa HOM05D008058 ORTHO05D010564 9.1e-18 95.1 105 44.8
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 7.7e-17 92.0 103 44.7
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-16 90.9 96 43.8
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-15 87.0 235 23.8
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.5e-15 87.0 235 23.8
TWI38G1152 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.2e-15 85.5 235 23.4
Oeu047270.2 Olea europaea HOM05D000700 ORTHO05D000397 2.3e-13 80.5 269 25.3
CANSAT01G2155 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-13 80.1 106 37.7
CANSAT25G3575 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-13 80.1 94 41.5
CANSAT80G2602 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-13 80.1 94 41.5
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 3.0e-13 80.1 247 23.1
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.0e-13 80.1 231 24.2
CsaV3_2G012010 Cucumis sativus L. HOM05D010240 ORTHO05D011271 5.2e-13 79.3 274 21.5
Oeu054335.1 Olea europaea HOM05D000700 ORTHO05D000397 5.2e-13 79.3 271 24.0
TWI77G0217 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-12 77.0 228 24.1
Oeu000458.1 Olea europaea HOM05D000700 ORTHO05D000397 3.4e-12 76.6 268 24.3
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 5.7e-12 75.9 228 23.7
CANSAT78G0252 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-11 74.7 95 35.8
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-11 74.3 110 36.4
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 1.7e-11 74.3 284 22.5
TWI18G1213 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.2e-11 73.9 232 22.8
Oeu043381.1 Olea europaea HOM05D000700 ORTHO05D000397 2.8e-11 73.6 233 23.2
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 4.9e-11 72.8 101 36.6
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-10 71.6 101 35.6
Oeu032337.1 Olea europaea HOM05D000700 ORTHO05D000397 1.1e-10 71.6 251 24.3
Oeu001907.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-10 71.2 268 23.5
Oeu046505.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-10 71.2 233 24.5
Oeu001970.1 Olea europaea HOM05D000700 ORTHO05D000397 1.8e-10 70.9 275 22.5
Oeu015595.1 Olea europaea HOM05D000700 ORTHO05D000397 2.4e-10 70.5 233 24.0
Oeu042449.1 Olea europaea HOM05D000700 ORTHO05D000397 3.1e-10 70.1 269 23.8
Oeu021150.1 Olea europaea HOM05D000700 ORTHO05D000397 4.1e-10 69.7 233 22.7
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 7.0e-10 68.9 236 22.0
Oeu034454.1 Olea europaea HOM05D000700 ORTHO05D000397 7.0e-10 68.9 233 24.5
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 9.2e-10 68.6 228 23.7
Oeu012308.1 Olea europaea HOM05D000700 ORTHO05D000397 1.6e-09 67.8 233 23.2
Oeu025257.1 Olea europaea HOM05D000700 ORTHO05D000397 1.6e-09 67.8 233 23.6
Oeu032894.1 Olea europaea HOM05D000700 ORTHO05D000397 1.6e-09 67.8 248 22.2
Oeu024098.1 Olea europaea HOM05D000700 ORTHO05D000397 2.0e-09 67.4 269 23.8
Oeu050189.1 Olea europaea HOM05D000700 ORTHO05D000397 2.0e-09 67.4 280 22.5
Oeu033761.1 Olea europaea HOM05D000700 ORTHO05D000397 2.7e-09 67.0 232 23.7
CANSAT54G1186 Cannabis sativa HOM05D008058 ORTHO05D001269 3.5e-09 66.6 123 30.9
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 4.5e-09 66.2 250 23.2
Oeu019371.1 Olea europaea HOM05D000700 ORTHO05D000397 4.5e-09 66.2 268 21.6
Oeu064841.1 Olea europaea HOM05D000700 ORTHO05D000397 4.5e-09 66.2 233 23.2
Oeu021256.1 Olea europaea HOM05D000700 ORTHO05D000397 1.0e-08 65.1 232 22.0
Oeu027636.1 Olea europaea HOM05D002749 ORTHO05D000708 1.0e-08 65.1 159 25.8
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-08 64.7 240 22.5
Oeu020533.1 Olea europaea HOM05D002749 ORTHO05D000708 1.3e-08 64.7 159 26.4
PGSC0003DMG400038255 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.3e-08 63.9 230 22.2
Oeu005506.1 Olea europaea HOM05D009665 ORTHO05D011335 5.0e-08 62.8 88 36.4
Oeu047930.1 Olea europaea HOM05D000700 ORTHO05D000397 5.0e-08 62.8 214 22.0
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 5.0e-08 62.8 280 22.1
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 6.6e-08 62.4 286 20.3
CANSAT21G0863 Cannabis sativa HOM05D008058 ORTHO05D001269 6.6e-08 62.4 82 40.2
Oeu050637.1 Olea europaea HOM05D000700 ORTHO05D000397 6.6e-08 62.4 233 23.2
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 8.6e-08 62.0 286 20.6
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 8.6e-08 62.0 279 18.6
Oeu055485.1 Olea europaea HOM05D000700 ORTHO05D000397 8.6e-08 62.0 235 23.0
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 1.1e-07 61.6 286 20.6
Oeu002619.1 Olea europaea HOM05D002749 ORTHO05D000708 1.1e-07 61.6 206 24.3
Oeu018258.2 Olea europaea HOM05D009665 ORTHO05D011335 1.1e-07 61.6 88 35.2
Sopen03g030630 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-07 61.6 228 21.1
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-07 60.8 279 18.6
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.5e-07 60.5 228 22.4
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-07 60.5 236 21.6
Oeu047400.1 Olea europaea HOM05D009665 ORTHO05D011335 3.3e-07 60.1 105 29.5
TWI12G1218 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-07 60.1 113 29.2
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-07 60.1 113 29.2
Oeu018450.1 Olea europaea HOM05D002749 ORTHO05D000708 4.3e-07 59.7 143 26.6
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-07 59.7 224 20.5
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-07 59.7 228 20.2
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.3e-07 59.7 170 23.5
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 5.6e-07 59.3 289 19.4
Oeu017076.1 Olea europaea HOM05D000700 ORTHO05D000397 5.6e-07 59.3 239 19.7
Oeu054092.1 Olea europaea HOM05D000700 ORTHO05D000397 5.6e-07 59.3 269 21.6
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 7.3e-07 58.9 279 18.3
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-07 58.9 170 21.2
TWI53G2114 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.3e-07 58.9 112 29.5
Oeu058647.1 Olea europaea HOM05D000700 ORTHO05D000397 9.5e-07 58.5 239 19.7
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 9.5e-07 58.5 228 20.2
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 9.5e-07 58.5 228 20.2
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 9.5e-07 58.5 228 20.2
Oeu009212.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-06 58.2 164 23.8
Oeu010714.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-06 58.2 234 20.1
Oeu013149.1 Olea europaea HOM05D009665 ORTHO05D011335 1.2e-06 58.2 96 30.2
Oeu049241.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-06 58.2 233 19.3
Oeu022282.1 Olea europaea HOM05D000700 ORTHO05D000397 1.6e-06 57.8 228 21.5
Oeu028064.1 Olea europaea HOM05D000700 ORTHO05D000397 1.6e-06 57.8 231 23.4
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-06 57.8 228 19.7
Oeu005231.1 Olea europaea HOM05D002749 ORTHO05D000708 2.8e-06 57.0 115 26.1
Sopen12g020250 Solanum pennellii HOM05D000541 ORTHO05D000137 2.8e-06 57.0 149 25.5
Oeu037062.1 Olea europaea HOM05D000700 ORTHO05D000397 3.6e-06 56.6 254 20.5
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 4.7e-06 56.2 227 22.5
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 6.1e-06 55.8 229 19.7
Oeu032254.1 Olea europaea HOM05D000700 ORTHO05D000397 6.1e-06 55.8 212 24.5
Oeu046709.1 Olea europaea HOM05D008641 ORTHO05D000397 6.1e-06 55.8 161 21.1
Oeu020288.1 Olea europaea HOM05D000700 ORTHO05D000397 8.0e-06 55.5 214 21.5


User provided reference genes

Program Settings