Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 3.8e-79 298.1 152 100.0
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 5.9e-64 247.7 152 80.3
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 6.5e-63 244.2 152 80.9
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.1e-62 243.4 152 80.3
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.9e-62 242.7 152 80.3
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 3.2e-62 241.9 152 78.3
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 4.2e-62 241.5 152 80.9
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.6e-61 239.6 152 77.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.6e-61 239.6 152 78.3
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 2.7e-61 238.8 152 78.3
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 2.7e-61 238.8 152 78.3
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 4.6e-61 238.0 153 81.0
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 7.9e-61 237.3 152 77.0
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 7.9e-61 237.3 151 78.1
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.0e-60 236.9 152 80.3
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.0e-60 236.9 151 77.5
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.3e-60 236.5 152 76.3
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.3e-60 236.5 152 75.7
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 1.3e-60 236.5 151 79.5
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.8e-60 236.1 152 76.3
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.3e-60 235.7 143 82.5
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 2.3e-60 235.7 152 77.0
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.0e-60 235.3 152 77.0
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 3.0e-60 235.3 153 81.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 3.9e-60 235.0 152 77.6
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 3.9e-60 235.0 152 77.0
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 5.1e-60 234.6 151 77.5
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 5.1e-60 234.6 152 75.0
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.1e-60 234.6 152 75.0
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 5.1e-60 234.6 152 78.9
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 8.7e-60 233.8 152 75.0
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.9e-59 232.6 152 75.7
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.9e-59 232.6 152 74.3
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 9.7e-59 230.3 143 79.7
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 2.8e-58 228.8 141 80.9
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 3.7e-58 228.4 144 74.3
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 3.7e-58 228.4 144 75.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 4.8e-58 228.0 143 79.0
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 6.3e-58 227.6 152 77.0
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.1e-57 226.9 143 77.6
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.8e-57 226.1 143 76.2
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 2.4e-57 225.7 152 74.3
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 2.4e-57 225.7 142 78.2
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 2.4e-57 225.7 141 78.0
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 5.3e-57 224.6 143 76.9
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 6.9e-57 224.2 152 75.0
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 9.0e-57 223.8 143 79.0
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.5e-56 223.0 142 79.6
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 2.6e-56 222.2 143 77.6
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 2.6e-56 222.2 144 76.4
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 3.4e-56 221.9 141 78.0
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.7e-55 219.5 152 69.7
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.2e-55 219.2 159 71.1
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 2.2e-55 219.2 151 73.5
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.2e-55 219.2 145 74.5
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 6.5e-55 217.6 142 76.1
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.5e-54 215.7 151 72.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 5.5e-54 214.5 139 77.0
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 1.6e-53 213.0 139 74.1
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 3.6e-53 211.8 142 73.9
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.4e-52 209.9 153 69.3
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.8e-52 209.5 141 73.0
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.9e-52 208.4 140 72.1
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.9e-52 208.4 140 72.1
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 6.7e-52 207.6 131 77.9
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 8.8e-52 207.2 152 71.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.1e-51 206.8 153 68.6
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 3.3e-51 205.3 143 72.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.7e-51 204.5 143 72.7
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.3e-50 203.4 143 74.1
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.4e-49 199.1 137 71.5
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 6.9e-49 197.6 157 64.3
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 9.1e-49 197.2 140 71.4
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 9.1e-49 197.2 152 65.1
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.2e-48 196.8 129 75.2
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.9e-48 194.5 190 58.9
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 5.9e-48 194.5 142 69.7
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 5.9e-48 194.5 130 73.8
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.2e-45 186.8 148 66.9
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 1.8e-44 183.0 111 82.0
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.0e-43 179.5 140 65.7
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.6e-43 179.1 132 68.9
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 4.4e-43 178.3 111 77.5
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.7e-42 176.4 152 59.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.8e-41 172.9 156 59.6
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 9.1e-41 170.6 133 66.2
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 1.2e-40 170.2 137 59.9
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.2e-40 170.2 138 62.3
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 2.0e-40 169.5 126 68.3
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 4.5e-40 168.3 154 58.4
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.7e-39 166.4 141 63.1
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.9e-39 165.6 153 57.5
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.9e-39 165.6 153 57.5
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 6.5e-39 164.5 152 55.9
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 6.5e-39 164.5 149 57.0
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 8.5e-39 164.1 112 70.5
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.9e-38 162.9 149 57.0
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 3.2e-38 162.2 145 57.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.2e-38 161.8 149 56.4
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 3.6e-37 158.7 143 57.3
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 4.7e-37 158.3 149 55.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 4.7e-37 158.3 149 55.7
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 6.1e-37 157.9 143 57.3
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 6.1e-37 157.9 139 54.7
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 3.0e-36 155.6 143 55.9
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 1.5e-35 153.3 116 67.2
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 7.5e-35 151.0 111 69.4
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 2.0e-32 142.9 116 62.9
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.0e-31 140.6 143 54.5
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.2e-31 139.4 147 57.1
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.0e-28 129.0 141 50.4
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.3e-26 123.6 77 76.6
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-25 120.6 81 72.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 3.0e-20 102.4 65 73.8
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 3.5e-16 89.0 155 41.3
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 5.9e-16 88.2 75 60.0
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 2.9e-15 85.9 97 50.5
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 5.6e-14 81.6 112 45.5
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 5.2e-12 75.1 42 85.7
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 1.0e-07 60.8 138 32.6
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 2.5e-06 56.2 34 79.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 2.5e-06 56.2 34 79.4


User provided reference genes

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