Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 2.8e-52 208.4 107 100.0
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.0e-26 122.5 107 61.7
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.9e-21 105.9 109 56.0
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.6e-20 102.8 113 55.8
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 9.0e-19 97.1 106 56.6
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 3.4e-18 95.1 120 50.0
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 5.8e-18 94.4 100 57.0
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 8.4e-17 90.5 101 55.4
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 5.5e-16 87.8 111 51.4
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 7.1e-16 87.4 92 54.3
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.1e-15 85.9 108 51.9
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 2.7e-15 85.5 103 53.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 3.5e-15 85.1 108 51.9
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 3.5e-15 85.1 58 70.7
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.6e-15 84.7 59 64.4
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 6.0e-15 84.3 117 48.7
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 6.0e-15 84.3 79 57.0
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.3e-14 83.2 109 49.5
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 3.0e-14 82.0 97 55.7
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 3.9e-14 81.6 109 46.8
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 6.7e-14 80.9 96 51.0
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 6.7e-14 80.9 92 51.1
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 8.7e-14 80.5 102 52.9
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.1e-13 80.1 116 50.9
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.9e-13 79.3 71 57.7
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.5e-13 79.0 93 52.7
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 3.3e-13 78.6 103 48.5
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 4.3e-13 78.2 116 50.0
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.3e-13 78.2 116 50.0
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.3e-13 78.2 98 48.0
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.6e-13 77.0 116 50.9
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 9.6e-13 77.0 78 57.7
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 1.3e-12 76.6 100 47.0
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.3e-12 76.6 116 50.0
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.3e-12 76.6 58 67.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.3e-12 76.6 93 51.6
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.1e-12 75.9 59 66.1
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 3.7e-12 75.1 52 69.2
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 4.8e-12 74.7 115 51.3
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 6.2e-12 74.3 85 52.9
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 6.2e-12 74.3 89 51.7
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 8.2e-12 73.9 82 51.2
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 8.2e-12 73.9 114 46.5
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 1.1e-11 73.6 94 47.9
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 1.1e-11 73.6 88 51.1
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.4e-11 73.2 68 58.8
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.8e-11 72.8 92 47.8
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 1.8e-11 72.8 95 49.5
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 3.1e-11 72.0 103 42.7
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.1e-11 72.0 96 42.7
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 5.3e-11 71.2 104 46.2
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 6.9e-11 70.9 81 55.6
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 9.0e-11 70.5 103 43.7
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.2e-10 70.1 102 43.1
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.5e-10 69.7 98 42.9
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.5e-10 69.7 97 48.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 1.5e-10 69.7 104 46.2
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 2.6e-10 68.9 97 48.5
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 4.5e-10 68.2 62 58.1
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 7.6e-10 67.4 104 45.2
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 1.0e-09 67.0 100 45.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.0e-09 67.0 53 58.5
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.3e-09 66.6 95 48.4
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.3e-09 66.6 102 44.1
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 1.7e-09 66.2 61 57.4
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.2e-09 65.9 103 41.7
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.2e-09 65.9 106 40.6
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 2.9e-09 65.5 103 40.8
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 2.9e-09 65.5 103 40.8
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 2.9e-09 65.5 103 40.8
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 3.8e-09 65.1 103 44.7
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 4.9e-09 64.7 93 43.0
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 6.5e-09 64.3 57 54.4
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 8.4e-09 63.9 54 55.6
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 8.4e-09 63.9 94 46.8
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 1.1e-08 63.5 103 39.8
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 1.1e-08 63.5 103 39.8
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 1.1e-08 63.5 91 39.6
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.1e-08 63.5 77 49.4
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 1.4e-08 63.2 106 41.5
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 1.9e-08 62.8 106 43.4
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 3.2e-08 62.0 104 41.3
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 5.5e-08 61.2 105 39.0
CDE10G0216 Ceratophyllum demersum HOM05D001577 ORTHO05D008017 5.5e-08 61.2 56 53.6
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 7.1e-08 60.8 115 42.6
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 7.1e-08 60.8 94 45.7
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 9.3e-08 60.5 39 74.4
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.6e-07 59.7 74 47.3
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 2.7e-07 58.9 100 45.0
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 6.0e-07 57.8 113 39.8
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 6.0e-07 57.8 89 41.6
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.9e-07 57.4 76 47.4
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 1.0e-06 57.0 97 41.2
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.0e-06 57.0 105 39.0
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.8e-06 56.2 89 43.8
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.0e-06 55.5 94 38.3
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 3.9e-06 55.1 91 41.8


User provided reference genes

Program Settings