Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 0.0e+00 1194.1 598 100.0
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 5.1e-180 635.2 613 58.7
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.4e-169 599.7 630 55.9
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 3.3e-163 579.3 644 54.2
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 2.0e-160 570.1 623 53.5
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 4.5e-160 568.9 625 53.9
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.9e-158 563.5 520 59.4
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 8.0e-157 558.1 737 48.3
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 2.4e-153 546.6 611 53.5
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 3.8e-151 539.3 630 52.7
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 4.2e-150 535.8 561 55.4
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.2e-150 535.8 652 50.2
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.5e-147 527.3 620 52.1
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 7.5e-147 525.0 512 57.6
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 8.3e-146 521.5 525 56.6
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.1e-145 521.2 620 51.5
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.4e-145 520.8 636 51.1
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.0e-144 516.9 523 57.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.2e-143 513.5 814 43.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 4.2e-142 509.2 609 51.9
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.4e-140 504.2 545 54.7
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.2e-139 501.1 632 50.9
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.4e-139 499.6 610 51.6
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 2.2e-138 496.9 623 50.6
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 6.3e-138 495.4 553 52.8
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 3.1e-137 493.0 544 53.5
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 7.0e-137 491.9 626 50.5
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 7.0e-137 491.9 610 50.3
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.2e-136 491.1 626 50.3
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 2.7e-136 490.0 496 56.7
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 8.6e-135 485.0 573 49.9
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 5.6e-134 482.3 536 52.6
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.4e-132 477.6 627 47.7
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 1.2e-131 474.6 523 54.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 2.6e-131 473.4 607 47.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 1.7e-130 470.7 494 54.9
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.2e-130 470.3 521 53.6
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.9e-130 469.9 600 48.3
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 8.3e-130 468.4 486 55.6
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.8e-129 467.2 609 47.5
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 3.2e-129 466.5 590 49.0
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 4.6e-128 462.6 453 58.1
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 4.6e-128 462.6 479 55.7
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 7.8e-128 461.8 437 59.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.7e-127 460.7 499 52.5
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.5e-126 456.8 609 49.8
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 3.3e-126 456.4 633 47.2
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 5.6e-126 455.7 521 52.8
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 9.5e-126 454.9 495 53.9
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.3e-124 450.3 461 56.6
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 5.8e-123 445.7 526 49.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 5.8e-123 445.7 508 50.4
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 9.8e-123 444.9 550 50.7
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.3e-122 444.5 478 55.9
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 4.9e-122 442.6 619 48.0
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 4.9e-122 442.6 619 48.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.9e-122 442.6 456 57.7
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.1e-121 441.4 560 49.1
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.4e-121 441.0 509 52.5
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 9.2e-121 438.3 500 51.2
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.0e-120 437.2 619 47.7
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 1.1e-118 431.4 545 49.2
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.1e-118 431.4 432 57.9
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 9.5e-118 428.3 520 50.2
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 9.5e-118 428.3 517 51.3
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.2e-117 427.9 457 54.7
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.4e-116 424.5 538 48.9
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.2e-115 421.4 547 47.5
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 2.0e-115 420.6 536 48.1
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 2.6e-115 420.2 540 48.0
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 5.8e-115 419.1 534 47.6
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 4.1e-113 412.9 540 47.6
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 7.8e-112 408.7 539 45.8
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.0e-111 408.3 522 49.2
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.4e-107 392.9 467 50.3
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 9.9e-107 391.7 486 48.6
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.3e-106 391.3 419 54.9
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 4.9e-106 389.4 531 48.4
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.1e-105 388.3 440 52.5
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.5e-104 383.3 481 48.6
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.5e-104 383.3 479 48.6
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.5e-104 383.3 464 50.2
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.7e-103 380.9 462 49.6
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 1.7e-103 380.9 417 53.0
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 5.1e-103 379.4 562 43.2
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 8.6e-103 378.6 531 47.1
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.1e-102 378.3 518 48.5
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.9e-102 377.5 603 41.8
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 4.3e-102 376.3 520 47.3
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 9.6e-102 375.2 513 48.3
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 9.6e-102 375.2 482 48.8
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 3.6e-101 373.2 400 54.0
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 8.1e-101 372.1 408 53.9
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 8.1e-101 372.1 496 48.4
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.4e-100 371.3 513 47.8
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 2.4e-100 370.5 409 51.6
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 4.4e-99 366.3 355 57.2
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 7.6e-99 365.5 423 52.7
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 7.6e-99 365.5 423 52.7
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 9.9e-99 365.2 446 51.6
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 6.0e-96 355.9 393 52.4
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.7e-95 354.4 417 49.2
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.5e-94 351.3 366 53.3
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.5e-94 350.5 375 51.5
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.3e-94 350.1 431 49.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 3.6e-93 346.7 406 48.5
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.0e-92 343.2 334 55.4
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.4e-91 340.1 418 47.4
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.5e-91 339.7 371 53.4
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 9.9e-91 338.6 480 46.2
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 6.4e-90 335.9 453 46.6
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 8.4e-90 335.5 439 48.1
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.4e-89 334.7 452 46.5
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 4.2e-89 333.2 379 48.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 7.1e-89 332.4 518 44.0
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.5e-88 330.1 447 46.5
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.6e-88 329.7 377 52.3
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 2.5e-86 323.9 443 45.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 2.5e-86 323.9 444 45.7
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 2.5e-86 323.9 443 45.8
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.3e-85 321.6 473 44.8
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.6e-85 321.2 369 49.3
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 2.1e-85 320.9 453 45.7
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.5e-83 314.7 400 47.2
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.1e-81 308.5 342 48.2
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.4e-81 308.1 362 50.6
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.4e-76 290.8 398 46.7
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-75 288.1 393 46.6
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.0e-71 273.9 277 56.7
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 6.3e-69 266.2 247 60.3
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.0e-66 258.8 226 60.6
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 5.5e-65 253.1 370 42.7
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.2e-61 241.1 330 44.2
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 8.2e-61 239.2 383 40.5
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.4e-60 238.4 280 50.7
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 1.0e-50 205.7 187 57.8
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.6e-48 198.4 358 37.7
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 3.0e-47 194.1 240 51.7
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 8.2e-45 186.0 313 40.6
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 6.1e-40 169.9 222 49.5
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 5.2e-39 166.8 375 34.1
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.1e-36 159.1 455 33.4
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 2.4e-36 157.9 528 31.4
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.0e-26 125.9 200 38.5
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.1e-25 122.5 174 44.8
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.3e-21 109.0 213 34.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.3e-21 109.0 388 28.6
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 6.6e-18 96.7 260 35.8
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.1e-17 95.9 254 32.7
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 6.2e-08 63.5 54 55.6
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.4e-06 57.8 47 61.7


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