Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 5.2e-139 497.7 243 100.0
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.4e-64 250.4 187 64.7
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.4e-64 250.4 208 62.0
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 2.7e-63 246.1 192 62.5
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 7.9e-63 244.6 222 55.9
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 3.9e-62 242.3 191 60.2
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.3e-60 237.3 226 54.9
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 2.2e-60 236.5 209 57.9
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 2.8e-60 236.1 189 60.3
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 2.8e-60 236.1 237 52.3
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.4e-59 233.8 189 60.3
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.4e-59 233.8 189 63.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 5.3e-59 231.9 217 53.9
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.3e-59 231.9 189 60.8
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 1.2e-58 230.7 226 53.1
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.5e-58 230.3 188 58.5
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 2.0e-58 229.9 190 58.4
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.6e-58 229.6 237 52.3
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 3.4e-58 229.2 187 60.4
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 7.7e-58 228.0 185 58.4
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.3e-57 227.3 189 56.1
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 2.9e-57 226.1 224 52.7
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 8.5e-57 224.6 185 58.9
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-55 220.7 246 50.4
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 1.4e-54 217.2 229 51.5
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.8e-54 216.9 188 56.9
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 3.9e-54 215.7 189 54.0
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.5e-53 213.8 231 46.3
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 3.3e-53 212.6 185 56.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 3.3e-53 212.6 185 56.8
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.4e-53 212.2 185 55.7
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 5.7e-53 211.8 185 56.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 1.7e-52 210.3 185 57.3
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.8e-52 209.5 188 55.3
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.8e-52 209.5 188 55.3
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 4.8e-52 208.8 185 56.2
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 6.3e-52 208.4 187 53.5
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.4e-51 207.2 185 55.7
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.8e-51 206.8 186 54.3
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 2.4e-51 206.5 190 52.1
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.1e-51 206.1 219 50.7
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 4.1e-51 205.7 186 55.9
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 4.1e-51 205.7 201 53.2
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 2.6e-50 203.0 221 47.5
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 3.5e-50 202.6 187 55.1
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.5e-50 202.2 163 57.7
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 1.0e-49 201.1 217 47.9
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 2.2e-49 199.9 216 50.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.5e-49 198.4 199 52.3
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 6.5e-49 198.4 208 48.6
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.9e-48 196.8 213 49.3
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.2e-48 196.1 219 49.3
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 7.2e-48 194.9 190 52.1
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 9.4e-48 194.5 185 53.0
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 6.1e-47 191.8 180 53.9
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 8.2e-44 181.4 215 47.9
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 8.2e-44 181.4 217 45.2
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 4.1e-43 179.1 135 60.0
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 7.0e-43 178.3 215 44.2
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.6e-42 176.4 212 45.3
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.7e-41 173.7 169 51.5
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 6.5e-41 171.8 164 52.4
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 8.5e-41 171.4 157 55.4
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 4.2e-40 169.1 213 47.4
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 3.6e-39 166.0 124 61.3
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 4.7e-39 165.6 185 47.0
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 1.0e-38 164.5 190 47.4
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 2.3e-38 163.3 150 51.3
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 3.0e-38 162.9 220 41.8
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 5.2e-38 162.2 185 46.5
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 8.8e-38 161.4 166 51.2
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.2e-37 161.0 143 53.1
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 3.4e-37 159.5 183 46.4
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 3.4e-37 159.5 152 53.3
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 7.5e-37 158.3 217 41.9
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 9.7e-37 157.9 121 61.2
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 1.4e-35 154.1 124 58.9
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 9.1e-35 151.4 118 61.9
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 9.1e-35 151.4 131 54.2
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 2.1e-31 140.2 182 42.9
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.0e-29 133.7 173 42.2
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 7.5e-29 131.7 130 47.7
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 8.3e-28 128.3 99 62.6
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.1e-27 125.9 132 50.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.7e-25 120.6 139 47.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 3.8e-25 119.4 145 46.9
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.5e-21 107.5 98 56.1
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 5.7e-21 105.5 74 59.5
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.1e-16 91.3 186 30.1
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 3.3e-16 89.7 109 43.1
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.6e-15 87.4 109 42.2
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 6.8e-14 82.0 183 31.1
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 6.0e-10 68.9 59 59.3
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 6.6e-09 65.5 62 54.8
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.4e-06 57.8 206 25.2
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 4.0e-06 56.2 93 36.6


User provided reference genes

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