Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.9e-140 501.9 253 100.0
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 7.6e-109 397.5 245 81.2
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 7.9e-106 387.5 242 78.1
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 7.9e-106 387.5 255 76.9
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 1.6e-103 379.8 246 76.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.8e-103 379.0 250 77.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.8e-102 376.3 243 78.6
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 4.0e-102 375.2 252 74.2
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 9.0e-102 374.0 252 74.6
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 2.6e-101 372.5 253 75.1
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.6e-101 372.5 252 74.6
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.9e-100 369.0 248 75.8
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 4.9e-100 368.2 249 74.7
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.1e-99 367.1 249 74.7
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.1e-99 367.1 247 74.9
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 5.5e-99 364.8 250 73.6
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 7.1e-99 364.4 243 76.1
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.7e-98 362.5 246 75.6
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 3.5e-98 362.1 243 74.1
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 3.5e-98 362.1 281 69.0
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.8e-97 359.8 241 75.1
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 3.0e-97 359.0 242 74.4
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 3.0e-97 359.0 241 74.7
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 5.1e-97 358.2 250 72.8
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 6.7e-97 357.8 253 71.5
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 8.7e-97 357.5 253 73.9
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 8.7e-97 357.5 241 74.3
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.1e-96 357.1 280 66.4
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.1e-96 357.1 249 71.5
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.9e-96 356.3 252 71.0
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 3.3e-96 355.5 280 68.2
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.3e-96 355.1 281 68.0
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.7e-96 354.8 251 72.1
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.3e-95 353.6 243 73.7
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 3.7e-95 352.1 231 75.8
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 6.3e-95 351.3 251 70.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 6.3e-95 351.3 255 70.6
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 8.2e-95 350.9 280 67.5
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 8.2e-95 350.9 261 69.3
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.1e-94 350.5 242 73.6
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.4e-94 350.1 240 72.9
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.8e-94 349.7 251 70.1
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 2.4e-94 349.4 243 73.7
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 3.1e-94 349.0 253 71.9
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.2e-93 347.1 255 71.4
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 4.5e-93 345.1 255 69.8
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 7.6e-93 344.4 240 72.1
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.0e-92 344.0 251 70.5
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 8.5e-92 340.9 256 70.7
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 1.9e-91 339.7 260 66.9
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.2e-91 339.0 255 69.0
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 7.2e-91 337.8 284 63.7
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 1.2e-90 337.0 251 68.9
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.7e-90 335.9 255 68.2
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 6.1e-90 334.7 245 71.4
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.9e-90 334.3 255 65.9
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 1.0e-89 334.0 244 69.7
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 3.0e-89 332.4 261 65.5
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 3.0e-89 332.4 249 70.7
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.9e-89 332.0 255 66.3
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 5.1e-89 331.6 254 68.1
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.1e-88 330.5 256 67.2
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.9e-88 329.7 256 67.6
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.3e-88 328.9 261 65.9
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.3e-88 328.9 261 65.9
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 4.3e-88 328.6 255 66.3
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 5.7e-88 328.2 241 69.7
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 7.4e-88 327.8 261 64.0
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 7.4e-88 327.8 241 69.7
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.3e-87 327.0 254 67.3
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.6e-87 326.6 250 66.4
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.2e-87 326.2 252 65.1
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.8e-87 325.9 259 65.3
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 2.8e-87 325.9 239 70.7
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 4.8e-87 325.1 257 65.4
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 4.8e-87 325.1 257 65.4
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 6.3e-87 324.7 239 67.8
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 1.1e-86 323.9 248 66.1
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.4e-86 323.6 220 73.2
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 2.4e-86 322.8 256 66.0
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 3.1e-86 322.4 256 66.4
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 9.1e-86 320.9 267 63.7
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.5e-85 320.1 248 64.1
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 8.5e-84 314.3 264 61.7
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 8.5e-84 314.3 243 68.3
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 4.2e-83 312.0 259 62.9
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 2.1e-82 309.7 240 65.4
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.1e-80 303.9 235 64.3
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.1e-80 303.9 265 61.1
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.0e-80 303.1 238 63.0
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 7.4e-80 301.2 271 59.8
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.7e-76 290.0 250 60.4
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.0e-73 280.8 285 52.6
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 2.0e-72 276.6 220 65.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.6e-72 276.2 280 53.9
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 3.3e-72 275.8 188 74.5
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.6e-66 256.9 239 59.4
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 4.7e-66 255.4 185 73.0
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 5.7e-56 221.9 222 55.0
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 4.1e-54 215.7 271 44.6
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 7.0e-54 214.9 256 53.1
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.0e-52 211.1 262 44.3
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.2e-50 204.1 131 72.5
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 3.0e-49 199.5 252 46.8
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 5.7e-48 195.3 257 49.4
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 1.6e-45 187.2 128 67.2
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 2.3e-44 183.3 172 52.3
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 9.5e-35 151.4 151 59.6
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 1.4e-33 147.5 120 60.0
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 3.2e-30 136.3 128 60.2
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 6.4e-23 112.1 108 62.0
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 2.5e-19 100.1 144 36.8
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 5.2e-17 92.4 112 48.2
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.1e-09 68.2 50 58.0
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.0e-08 63.9 46 63.0
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.4e-08 63.2 38 81.6
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 7.6e-08 62.0 133 36.1
Actinidia36204 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.2e-06 56.6 56 57.1


User provided reference genes

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