Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 2.9e-97 358.6 185 100.0
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.9e-40 169.9 179 54.2
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.6e-39 165.2 183 55.2
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 2.3e-38 162.9 197 55.3
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.0e-38 162.5 180 52.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.0e-37 159.8 191 54.5
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.6e-37 159.5 194 52.6
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 4.4e-37 158.7 180 53.9
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 4.4e-37 158.7 194 53.6
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 4.4e-37 158.7 200 48.0
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 9.7e-37 157.5 199 50.3
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.2e-36 156.4 193 50.3
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 6.3e-36 154.8 189 49.7
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 4.1e-35 152.1 187 49.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.2e-34 150.6 181 51.4
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.5e-34 150.2 181 49.7
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.6e-34 149.4 185 48.1
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 7.7e-34 147.9 189 48.7
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.3e-33 147.1 194 46.4
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 8.5e-33 144.4 188 47.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 4.2e-32 142.1 187 46.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 9.4e-32 141.0 176 46.0
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.2e-31 140.6 174 50.0
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 2.7e-31 139.4 193 45.1
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 3.6e-31 139.0 188 51.1
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 6.1e-31 138.3 174 45.4
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.0e-30 137.5 186 47.8
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.8e-30 136.7 185 46.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.3e-30 136.3 189 44.4
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.9e-30 135.6 190 45.3
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 3.9e-30 135.6 191 43.5
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 5.2e-30 135.2 191 42.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 8.8e-30 134.4 194 42.8
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.1e-29 134.0 194 43.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.5e-29 133.7 179 45.8
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.0e-29 133.3 181 49.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 5.7e-29 131.7 185 42.2
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 7.4e-29 131.3 179 41.9
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 7.4e-29 131.3 176 46.6
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 7.4e-29 131.3 177 49.7
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 2.2e-28 129.8 177 45.2
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 2.2e-28 129.8 199 43.2
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 4.8e-28 128.6 183 38.3
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 6.3e-28 128.3 180 45.6
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 8.2e-28 127.9 184 44.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.1e-27 127.5 194 41.8
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.4e-27 127.1 192 42.2
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 2.4e-27 126.3 180 47.8
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.1e-27 125.9 184 41.3
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 4.1e-27 125.6 187 39.0
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 4.1e-27 125.6 189 46.6
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.3e-27 125.2 191 42.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.2e-26 124.0 195 43.6
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 1.2e-26 124.0 175 45.1
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.2e-26 124.0 175 45.1
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.6e-26 123.6 176 43.2
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.6e-26 122.9 175 44.6
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.5e-26 122.1 195 43.1
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 4.5e-26 122.1 177 43.5
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 5.9e-26 121.7 207 44.0
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 5.9e-26 121.7 179 41.3
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 7.7e-26 121.3 181 40.9
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.3e-25 120.6 179 43.6
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.3e-25 120.6 201 40.8
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 1.7e-25 120.2 189 40.2
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 2.9e-25 119.4 182 39.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.9e-25 119.4 173 43.9
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 5.0e-25 118.6 190 41.6
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 5.0e-25 118.6 190 41.6
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 5.0e-25 118.6 178 45.5
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 6.5e-25 118.2 201 36.8
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 6.5e-25 118.2 177 41.8
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 8.5e-25 117.9 191 41.4
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.9e-24 116.7 174 39.1
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.5e-24 116.3 174 39.7
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 3.2e-24 115.9 177 41.8
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 3.2e-24 115.9 177 41.8
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 4.2e-24 115.5 173 42.2
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 4.2e-24 115.5 178 41.6
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 5.5e-24 115.2 176 45.5
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 5.5e-24 115.2 173 42.8
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 7.2e-24 114.8 197 42.1
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.4e-24 114.4 197 42.1
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.2e-23 114.0 175 43.4
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.2e-23 114.0 183 41.5
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.2e-23 114.0 197 42.1
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.2e-23 114.0 185 44.3
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.2e-23 114.0 173 42.8
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.2e-23 114.0 215 38.1
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.6e-23 113.6 182 38.5
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.6e-23 113.6 182 38.5
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.6e-23 113.6 191 39.8
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 2.7e-23 112.8 192 40.6
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.6e-23 112.5 177 44.6
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.0e-22 110.9 175 41.1
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.4e-22 110.5 182 37.4
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.8e-22 110.2 196 36.2
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 2.3e-22 109.8 182 36.8
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.3e-22 109.8 187 40.1
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 3.0e-22 109.4 175 40.0
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 3.3e-21 105.9 167 40.7
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 5.7e-21 105.1 172 40.1
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 2.2e-20 103.2 177 37.3
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 4.8e-20 102.1 175 41.7
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 8.2e-20 101.3 182 38.5
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.1e-19 100.9 186 38.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 4.1e-19 99.0 181 40.9
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 5.3e-19 98.6 188 42.0
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.6e-18 97.1 177 41.2
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.7e-18 96.3 186 37.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 7.7e-18 94.7 177 36.2
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 7.7e-18 94.7 181 40.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 1.0e-17 94.4 177 36.2
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 8.5e-17 91.3 220 32.3
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.9e-16 90.1 170 34.1
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.2e-15 87.4 127 40.9
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.6e-15 87.0 169 35.5
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 2.7e-15 86.3 161 39.1
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 6.1e-15 85.1 174 32.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 6.1e-15 85.1 165 32.7
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 9.1e-11 71.2 173 30.6
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.0e-10 70.1 87 46.0
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 7.7e-10 68.2 175 32.0
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.0e-09 67.8 79 43.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.0e-09 67.8 54 68.5
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 1.7e-09 67.0 132 42.4
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.1e-08 64.3 107 38.3
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.5e-08 61.2 51 58.8
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 2.1e-07 60.1 128 35.9
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 6.1e-07 58.5 121 38.0


User provided reference genes

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