Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 1.5e-116 422.9 228 100.0
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 6.8e-32 141.7 215 42.3
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 1.4e-29 134.0 211 41.2
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 2.0e-28 130.2 211 40.8
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 2.0e-28 130.2 216 41.2
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.7e-28 129.8 213 40.8
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 6.6e-27 125.2 208 39.9
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 4.3e-26 122.5 206 39.8
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 9.5e-26 121.3 206 39.8
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.6e-25 120.6 206 39.3
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 1.4e-24 117.5 202 40.1
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 6.8e-24 115.2 233 34.8
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 1.5e-23 114.0 201 39.8
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 2.0e-23 113.6 213 39.0
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 5.8e-23 112.1 211 38.4
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 4.9e-22 109.0 209 39.2
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 4.9e-22 109.0 199 42.2
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 4.9e-22 109.0 208 37.5
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 1.9e-21 107.1 224 34.8
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 1.9e-21 107.1 214 39.3
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 2.4e-21 106.7 210 38.6
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 3.5e-20 102.8 200 38.0
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 4.6e-20 102.4 213 38.0
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 6.0e-20 102.1 199 37.2
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 6.0e-20 102.1 200 36.0
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 1.0e-19 101.3 199 39.2
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 1.0e-19 101.3 199 39.2
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 1.0e-19 101.3 211 37.0
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 1.3e-19 100.9 205 35.6
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 1.7e-19 100.5 209 35.4
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 1.7e-19 100.5 219 35.6
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 3.0e-19 99.8 200 36.0
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 3.0e-19 99.8 205 35.6
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 5.0e-19 99.0 232 34.1
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 6.6e-19 98.6 232 34.1
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 9.5e-18 94.7 202 34.7
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 9.5e-18 94.7 202 34.7
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 2.1e-17 93.6 180 40.0
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 2.8e-17 93.2 204 35.3
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 2.8e-17 93.2 222 34.2
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 3.6e-17 92.8 217 34.6
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 4.7e-17 92.4 198 35.4
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 8.1e-17 91.7 203 35.5
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 3.1e-16 89.7 216 32.4
Gohir.A04G060800 Gossypium hirsutum HOM05D007532 ORTHO05D009483 8.9e-16 88.2 234 33.3
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 2.0e-15 87.0 222 32.9
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 3.4e-15 86.3 216 32.9
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 3.4e-15 86.3 216 32.9
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 3.4e-15 86.3 216 32.9
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 7.5e-15 85.1 201 33.8
PSO384G2238 Papaver somniferum HOM05D007532 ORTHO05D009483 7.5e-15 85.1 216 34.3
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 9.8e-15 84.7 216 32.9
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 2.2e-14 83.6 214 32.2
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 3.7e-14 82.8 214 31.8
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 3.7e-14 82.8 207 33.8
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 3.7e-14 82.8 216 33.3
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 4.9e-14 82.4 216 33.3
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 4.9e-14 82.4 217 34.6
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 4.9e-14 82.4 200 33.5
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 6.4e-14 82.0 218 31.2
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 1.2e-12 77.8 226 34.1
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 1.3e-11 74.3 231 31.2
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 3.0e-11 73.2 210 33.8
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 6.6e-11 72.0 200 33.0
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 1.1e-10 71.2 208 35.1
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 1.1e-10 71.2 194 31.4
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 1.9e-10 70.5 214 30.4
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 3.3e-10 69.7 206 31.6
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 5.6e-10 68.9 207 33.3
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 7.3e-10 68.6 196 32.1
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 9.5e-10 68.2 139 36.7
ECA238G0408 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-09 67.8 179 32.4
Sp3g09870 Schrenkiella parvula HOM05D014261 ORTHO05D016579 6.2e-09 65.5 202 32.2
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 8.1e-09 65.1 188 32.4
THA.LOC104826804 Tarenaya hassleriana HOM05D014261 ORTHO05D016579 1.1e-08 64.7 206 31.1
Aa31LG10G7530 Aethionema arabicum HOM05D007532 ORTHO05D009483 1.4e-08 64.3 204 29.4
AL3G23190 Arabidopsis lyrata HOM05D014261 ORTHO05D016579 1.4e-08 64.3 203 31.5
Sc20g0006700 Simmondsia chinensis HOM05D007532 ORTHO05D009483 1.4e-08 64.3 135 35.6
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 4.0e-08 62.8 201 29.9
TAR369G0649 Trochodendron aralioides HOM05D002150 ORTHO05D002191 8.9e-08 61.6 213 29.6
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 1.2e-07 61.2 220 28.6
FAN10G3914 Fragaria x ananassa HOM05D002150 ORTHO05D002191 1.5e-07 60.8 221 29.4
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 2.0e-07 60.5 211 28.9
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 2.0e-07 60.5 211 28.9
Prupe.2G233200 Prunus persica HOM05D002150 ORTHO05D002191 2.0e-07 60.5 227 30.0
Rhsim09G0165300 Rhododendron simsii HOM05D002150 ORTHO05D002191 2.0e-07 60.5 221 29.9
DCAR_027636 Daucus carota HOM05D002150 ORTHO05D002191 2.6e-07 60.1 212 27.8
FAN01G1666 Fragaria x ananassa HOM05D002150 ORTHO05D002191 3.4e-07 59.7 232 28.4
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 3.4e-07 59.7 209 30.1
Lsat_1_v5_gn_2_119741 Lactuca sativa HOM05D002150 ORTHO05D002191 4.4e-07 59.3 214 29.4
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 4.4e-07 59.3 197 29.9
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 5.8e-07 58.9 198 31.3
Sp5g09820 Schrenkiella parvula HOM05D007532 ORTHO05D009483 7.6e-07 58.5 214 26.6
BolC1t05302H Brassica oleracea HOM05D014261 ORTHO05D016579 9.9e-07 58.2 199 30.7
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 9.9e-07 58.2 228 27.6
FAN01G1088 Fragaria x ananassa HOM05D002150 ORTHO05D002191 9.9e-07 58.2 232 28.4
FAN06G3415 Fragaria x ananassa HOM05D002150 ORTHO05D002191 9.9e-07 58.2 232 28.4
Potri.010G206100 Populus trichocarpa HOM05D002150 ORTHO05D002191 9.9e-07 58.2 219 28.8
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 9.9e-07 58.2 198 25.8
CARHR086190 Cardamine hirsuta HOM05D014261 ORTHO05D016579 1.7e-06 57.4 199 29.6
FvH4_7g22100 Fragaria vesca HOM05D002150 ORTHO05D002191 1.7e-06 57.4 228 29.4
TWI15G1205 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 3.7e-06 56.2 207 29.5
BNapus_Darmor_BZH_scaffold_145p00030 Brassica napus HOM05D014261 ORTHO05D016579 6.4e-06 55.5 198 30.8
HanXRQChr08g0220401 Helianthus annuus HOM05D002150 ORTHO05D002191 8.4e-06 55.1 225 28.0
Manes.07G114700 Manihot esculenta HOM05D002150 ORTHO05D002191 8.4e-06 55.1 213 29.1


User provided reference genes

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