Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0046 Cannabis sativa HOM05D008422 ORTHO05D000352 4.6e-178 627.9 338 100.0
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 8.4e-95 351.3 337 57.9
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 3.1e-81 306.2 278 59.7
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 3.0e-76 289.7 333 52.0
CANSAT80G2507 Cannabis sativa HOM05D008422 ORTHO05D000352 2.9e-71 273.1 219 65.8
CANSAT01G1774 Cannabis sativa HOM05D008422 ORTHO05D000352 1.2e-61 241.1 237 58.2
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 5.3e-57 225.7 277 48.7
CANSAT11G1142 Cannabis sativa HOM05D008422 ORTHO05D000352 9.0e-57 224.9 234 59.0
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 1.1e-51 208.0 290 44.1
CANSAT50G0001 Cannabis sativa HOM05D008422 ORTHO05D000352 2.5e-51 206.8 150 69.3
CANSAT11G0966 Cannabis sativa HOM05D008422 ORTHO05D000352 6.9e-49 198.7 148 69.6
CANSAT78G0541 Cannabis sativa HOM05D019409 ORTHO05D000352 8.5e-47 191.8 207 50.7
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 6.9e-41 172.2 217 50.2
CANSAT54G2253 Cannabis sativa HOM05D008422 ORTHO05D000352 1.5e-40 171.0 135 65.2
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 4.5e-32 142.9 114 63.2
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-31 141.0 280 35.0
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-30 136.3 112 60.7
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 5.5e-30 136.0 112 61.6
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-26 124.4 114 55.3
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-26 124.4 112 58.0
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 2.8e-26 123.6 330 30.3
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 3.5e-24 116.7 108 55.6
CANSAT64G2626 Cannabis sativa HOM05D008422 ORTHO05D000352 3.8e-23 113.2 130 47.7
CANSAT80G0164 Cannabis sativa HOM05D008422 ORTHO05D000352 6.5e-23 112.5 114 52.6
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-22 110.9 92 59.8
CANSAT01G1297 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-21 108.2 112 50.9
CANSAT80G0282 Cannabis sativa HOM05D008422 ORTHO05D000352 2.7e-21 107.1 112 50.9
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 7.5e-19 99.0 80 61.2
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 9.8e-19 98.6 114 48.2
CANSAT80G0247 Cannabis sativa HOM05D012483 ORTHO05D000352 1.4e-17 94.7 320 25.0
CANSAT80G2823 Cannabis sativa HOM05D019409 ORTHO05D000352 4.1e-17 93.2 67 68.7
CANSAT35G1177 Cannabis sativa HOM05D012483 ORTHO05D000352 7.0e-17 92.4 247 27.1
CANSAT54G2906 Cannabis sativa HOM05D008422 ORTHO05D000352 1.3e-15 88.2 294 26.2
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 8.6e-15 85.5 247 29.1
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 1.9e-14 84.3 260 28.8
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 9.5e-14 82.0 61 59.0
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 6.1e-13 79.3 269 24.5
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 2.3e-12 77.4 269 25.3
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 4.0e-12 76.6 285 28.4
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 6.8e-12 75.9 100 39.0
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 6.8e-12 75.9 269 25.7
CANSAT54G2130 Cannabis sativa HOM05D012483 ORTHO05D000352 8.9e-12 75.5 281 25.6
HanXRQChr10g0295011 Helianthus annuus HOM05D000047 ORTHO05D000044 2.0e-11 74.3 293 24.9
Oeu014351.1 Olea europaea HOM05D000047 ORTHO05D000044 5.7e-11 72.8 108 34.3
TWI59G1246 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 5.7e-11 72.8 299 26.1
CANSAT21G0361 Cannabis sativa HOM05D012483 ORTHO05D000352 7.5e-11 72.4 266 24.4
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 9.8e-11 72.0 260 24.2
arahy.Tifrunner.gnm1.ann1.6EH8Q5 Arachis hypogaea HOM05D000429 ORTHO05D000880 1.3e-10 71.6 100 36.0
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-10 71.2 115 34.8
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 2.2e-10 70.9 265 23.4
CSS0049794 Camellia sinensis var. sinensis HOM05D013752 ORTHO05D000352 2.2e-10 70.9 295 25.8
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 2.8e-10 70.5 112 33.0
CANSAT25G0316 Cannabis sativa HOM05D009938 ORTHO05D000352 2.8e-10 70.5 272 26.5
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 2.8e-10 70.5 256 23.8
HanXRQChr02g0044181 Helianthus annuus HOM05D003069 ORTHO05D002578 2.8e-10 70.5 292 24.7
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 2.8e-10 70.5 255 24.3
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.9e-10 69.7 275 25.5
CANSAT80G2143 Cannabis sativa HOM05D009938 ORTHO05D000880 1.1e-09 68.6 108 33.3
CANSAT35G0006 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-09 67.8 230 27.4
VMungo0540G1972 Vigna mungo HOM05D008322 ORTHO05D000880 2.4e-09 67.4 106 35.8
CANSAT80G0151 Cannabis sativa HOM05D009938 ORTHO05D000880 3.1e-09 67.0 293 24.2
CANSAT80G1547 Cannabis sativa HOM05D008422 ORTHO05D000352 3.1e-09 67.0 261 27.2
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 4.1e-09 66.6 259 25.1
Oeu003844.1 Olea europaea HOM05D001436 ORTHO05D000880 4.1e-09 66.6 107 33.6
TWI39G1023 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 4.1e-09 66.6 269 27.1
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 7.0e-09 65.9 149 32.9
MBI15_g44888_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.6e-08 64.7 112 34.8
CANSAT78G2509 Cannabis sativa HOM05D008422 ORTHO05D000352 2.0e-08 64.3 261 26.4
Oeu018352.1 Olea europaea HOM05D003069 ORTHO05D000880 2.7e-08 63.9 110 31.8
CANSAT25G0953 Cannabis sativa HOM05D008422 ORTHO05D000352 7.8e-08 62.4 244 26.6
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 7.8e-08 62.4 294 24.8
MBI15_g11945_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.0e-07 62.0 149 25.5
MBI18_g39969_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.0e-07 62.0 122 34.4
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 1.0e-07 62.0 283 24.0
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 1.0e-07 62.0 278 21.6
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.3e-07 60.8 107 32.7
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.9e-07 60.5 291 25.4
ECA247G0122 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.9e-07 60.5 269 22.7
MBI01_g37950_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.9e-07 60.5 83 37.3
TPR.G34595 Trifolium pratense HOM05D000429 ORTHO05D000880 2.9e-07 60.5 108 30.6
CANSAT25G2400 Cannabis sativa HOM05D000047 ORTHO05D000044 3.8e-07 60.1 60 61.7
CANSAT78G0676 Cannabis sativa HOM05D008422 ORTHO05D000352 3.8e-07 60.1 220 28.6
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.8e-07 60.1 176 28.4
Oeu059272.1 Olea europaea HOM05D011569 ORTHO05D000880 3.8e-07 60.1 85 35.3
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 6.6e-07 59.3 106 33.0
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 8.6e-07 58.9 106 28.3
ECA236G4115 Erigeron canadensis HOM05D000047 ORTHO05D002578 8.6e-07 58.9 278 23.0
MBI14_g08687_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 8.6e-07 58.9 110 31.8
Oeu015972.1 Olea europaea HOM05D001436 ORTHO05D000880 8.6e-07 58.9 104 30.8
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 1.1e-06 58.5 119 31.1
CANSAT21G1066 Cannabis sativa HOM05D009938 ORTHO05D000880 1.1e-06 58.5 252 24.2
Lj6P789T46 Lonicera japonica HOM05D001436 ORTHO05D000880 1.1e-06 58.5 107 29.9
VMungo0720G1635 Vigna mungo HOM05D008322 ORTHO05D000880 1.1e-06 58.5 106 33.0
CSS0009224 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 1.5e-06 58.2 135 31.1
CANSAT11G2410 Cannabis sativa HOM05D009938 ORTHO05D000880 1.5e-06 58.2 115 30.4
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-06 58.2 113 28.3
MBI16_g25487_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-06 58.2 102 31.4
QL10p000322 Quercus lobata HOM05D000429 ORTHO05D002449 1.5e-06 58.2 130 28.5
CSS0035142 Camellia sinensis var. sinensis HOM05D009600 ORTHO05D011803 1.9e-06 57.8 289 23.9
MBI17_g43984_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.9e-06 57.8 110 32.7
VMungo0464G0496 Vigna mungo HOM05D008322 ORTHO05D000880 1.9e-06 57.8 92 32.6
VMungo1215G0382 Vigna mungo HOM05D008322 ORTHO05D000880 1.9e-06 57.8 92 33.7
CSS0001426 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D001509 2.5e-06 57.4 115 31.3
VMungo0251G0875 Vigna mungo HOM05D008322 ORTHO05D000880 2.5e-06 57.4 121 32.2
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 3.3e-06 57.0 113 31.0
MBI18_g25255_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.3e-06 57.0 107 33.6
Oeu014576.1 Olea europaea HOM05D005901 ORTHO05D000880 4.3e-06 56.6 159 27.7
Oeu035291.1 Olea europaea HOM05D001436 ORTHO05D000880 4.3e-06 56.6 97 32.0
CSS0016049 Camellia sinensis var. sinensis HOM05D009643 ORTHO05D010737 5.6e-06 56.2 106 32.1
ECA232G3051 Erigeron canadensis HOM05D001690 ORTHO05D002627 5.6e-06 56.2 88 33.0
ECA246G5165 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.6e-06 56.2 264 26.5
PSO675G8090 Papaver somniferum HOM05D000429 ORTHO05D002449 5.6e-06 56.2 106 32.1
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.3e-06 55.8 106 28.3
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 7.3e-06 55.8 261 25.7
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 7.3e-06 55.8 261 24.5
ECA236G2529 Erigeron canadensis HOM05D003069 ORTHO05D002578 7.3e-06 55.8 255 25.5
MBI19_g45780_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.3e-06 55.8 160 27.5
ECA232G0020 Erigeron canadensis HOM05D001690 ORTHO05D002578 9.5e-06 55.5 108 27.8
ECA240G4216 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.5e-06 55.5 110 30.0
ECA247G3028 Erigeron canadensis HOM05D003069 ORTHO05D002578 9.5e-06 55.5 110 29.1
VMungo1127G1971 Vigna mungo HOM05D008322 ORTHO05D000880 9.5e-06 55.5 105 33.3


User provided reference genes

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