Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 4.1e-84 314.7 161 100.0
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.8e-47 193.0 166 64.5
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.9e-44 183.0 166 62.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 3.2e-44 182.2 166 64.5
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 4.2e-44 181.8 166 63.9
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 6.7e-42 174.5 163 62.6
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 8.7e-42 174.1 157 61.8
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.5e-41 173.3 168 58.3
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.5e-41 173.3 168 58.3
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 5.6e-41 171.4 157 61.8
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 6.2e-40 167.9 178 55.6
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 3.1e-39 165.6 163 57.7
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 2.0e-38 162.9 164 57.9
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.0e-37 160.6 179 53.6
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 2.2e-37 159.5 156 58.3
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 2.5e-36 156.0 170 54.7
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 5.5e-36 154.8 171 52.6
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 9.3e-36 154.1 170 52.9
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.2e-35 153.7 161 53.4
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 2.7e-35 152.5 162 53.1
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.5e-35 152.1 156 57.1
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.5e-35 152.1 156 57.1
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 4.6e-35 151.8 168 54.2
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.9e-35 151.0 156 56.4
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.0e-34 150.6 169 51.5
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 5.1e-34 148.3 172 50.0
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 6.7e-34 147.9 158 56.3
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 6.7e-34 147.9 168 53.6
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 6.7e-34 147.9 163 54.0
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.1e-33 147.1 178 51.7
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.5e-33 146.7 162 51.2
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.3e-32 143.7 168 48.8
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 2.2e-32 142.9 162 54.9
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 3.7e-32 142.1 178 48.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.8e-32 141.7 158 54.4
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.8e-31 139.8 177 48.0
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 7.6e-30 134.4 178 46.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.9e-29 132.5 157 46.5
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 5.0e-29 131.7 159 51.6
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.5e-29 131.3 157 45.9
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 8.5e-29 131.0 142 54.9
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.1e-28 130.6 162 50.0
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.4e-28 130.2 166 47.0
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 5.5e-28 128.3 165 47.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 7.2e-28 127.9 158 51.3
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.2e-27 127.1 176 43.8
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 4.6e-27 125.2 141 54.6
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 3.0e-26 122.5 168 45.8
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 6.7e-26 121.3 163 46.0
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 1.9e-25 119.8 160 45.0
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 3.3e-25 119.0 166 43.4
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 4.3e-25 118.6 160 43.1
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.8e-24 115.9 158 47.5
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.8e-24 115.9 157 43.3
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 3.7e-24 115.5 166 44.0
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 4.8e-24 115.2 154 49.4
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.1e-23 114.0 147 53.1
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 1.1e-23 114.0 154 48.1
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.1e-23 114.0 170 46.5
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 5.3e-23 111.7 156 49.4
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 5.3e-23 111.7 142 48.6
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.5e-22 110.2 151 50.3
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.5e-22 110.2 157 45.2
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 3.4e-22 109.0 186 40.9
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 5.9e-22 108.2 156 49.4
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 5.9e-22 108.2 156 49.4
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 7.7e-22 107.8 171 40.4
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.3e-21 107.1 151 46.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 2.9e-21 105.9 155 43.9
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 3.8e-21 105.5 156 50.0
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 6.5e-21 104.8 156 45.5
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 1.1e-20 104.0 160 42.5
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.1e-20 104.0 178 42.1
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 1.4e-20 103.6 156 49.4
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.5e-20 102.8 170 41.8
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.6e-19 100.1 152 46.1
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 1.8e-18 96.7 155 41.3
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 2.0e-17 93.2 188 39.4
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 2.6e-17 92.8 189 39.2
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 5.7e-17 91.7 154 45.5
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 5.7e-17 91.7 188 38.8
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 2.2e-16 89.7 104 51.9
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 4.1e-15 85.5 161 37.3
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.5e-14 83.6 171 39.8
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 4.5e-14 82.0 163 37.4
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 7.7e-14 81.3 75 56.0
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.7e-13 80.1 162 38.3
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 4.2e-12 75.5 175 38.3
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.2e-11 73.9 161 33.5
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 3.6e-11 72.4 133 42.1
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 3.6e-11 72.4 159 37.7
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.4e-10 70.5 113 44.2
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 3.0e-10 69.3 175 33.1


User provided reference genes

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