Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4347 Cannabis sativa HOM05D007870 ORTHO05D010015 3.3e-13 78.2 82 100.0
Psat4g155360 Pisum sativum HOM05D007870 ORTHO05D010015 1.4e-08 62.8 82 69.5
Nn6g33472 Nelumbo nucifera HOM05D007870 ORTHO05D010015 1.9e-08 62.4 82 73.2
Dinv43804 Davidia involucrata HOM05D007870 ORTHO05D010015 2.5e-08 62.0 82 67.1
TPR.G39935 Trifolium pratense HOM05D007870 ORTHO05D010015 7.1e-08 60.5 82 81.7
TWI23G0891 Tripterygium wilfordii HOM05D007870 ORTHO05D010015 1.2e-07 59.7 82 68.3
Actinidia10023 Actinidia chinensis HOM05D007870 ORTHO05D010015 2.1e-07 58.9 78 79.5
PGR031G0106 Punica granatum HOM05D007870 ORTHO05D010015 2.1e-07 58.9 82 79.3
QL08p049047 Quercus lobata HOM05D007870 ORTHO05D010015 2.1e-07 58.9 80 46.2
RcHm_v2.0_Chr1g0354641 Rosa chinensis HOM05D007870 ORTHO05D010015 2.7e-07 58.5 82 63.4
TAR375G0654 Trochodendron aralioides HOM05D007870 ORTHO05D010015 2.7e-07 58.5 83 86.7
Os02g0824400 Oryza sativa ssp. japonica HOM05D007870 ORTHO05D010015 4.6e-07 57.8 82 47.6
Phvul.010G097100 Phaseolus vulgaris HOM05D007870 ORTHO05D010015 4.6e-07 57.8 82 47.6
Lj3g0023390 Lotus japonicus HOM05D007870 ORTHO05D010015 6.1e-07 57.4 80 75.0
Zm00001eb190830 Zea mays HOM05D007870 ORTHO05D010015 7.9e-07 57.0 82 61.0
vmacro13293 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.0e-06 56.6 84 70.2
vmacro23343 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.0e-06 56.6 84 70.2
CDE09G0625 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 1.3e-06 56.2 83 57.8
CDE11G0999 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 1.3e-06 56.2 83 62.7
ATR0680G221 Amborella trichopoda HOM05D007870 ORTHO05D010015 1.8e-06 55.8 84 78.6
FAN06G1295 Fragaria x ananassa HOM05D007870 ORTHO05D010015 1.8e-06 55.8 82 65.9
Lalb_Chr04g0256851 Lupinus albus HOM05D007870 ORTHO05D010015 2.3e-06 55.5 83 79.5
arahy.Tifrunner.gnm1.ann1.52J70V Arachis hypogaea HOM05D007870 ORTHO05D010015 3.0e-06 55.1 82 45.1
arahy.Tifrunner.gnm1.ann1.LLY2P5 Arachis hypogaea HOM05D007870 ORTHO05D010015 3.0e-06 55.1 82 45.1
FvH4_7g13990 Fragaria vesca HOM05D007870 ORTHO05D010015 3.0e-06 55.1 82 56.1
FAN03G1806 Fragaria x ananassa HOM05D007870 ORTHO05D010015 3.0e-06 55.1 82 69.5
Gorai.004G158100 Gossypium raimondii HOM05D007870 ORTHO05D010015 3.0e-06 55.1 83 84.3
Sopen01g038280 Solanum pennellii HOM05D007870 ORTHO05D010015 3.9e-06 54.7 82 40.2
MELO3C006117.2 Cucumis melo HOM05D007870 ORTHO05D010015 5.1e-06 54.3 83 55.4
FAN01G0023 Fragaria x ananassa HOM05D007870 ORTHO05D010015 5.1e-06 54.3 82 72.0
FAN06G2504 Fragaria x ananassa HOM05D007870 ORTHO05D010015 5.1e-06 54.3 82 72.0
Lalb_Chr10g0097081 Lupinus albus HOM05D007870 ORTHO05D010015 5.1e-06 54.3 83 65.1
Peaxi162Scf00056g00013 Petunia axillaris HOM05D007870 ORTHO05D010015 5.1e-06 54.3 82 74.4
Thecc.01G360900 Theobroma cacao HOM05D007870 ORTHO05D010015 6.7e-06 53.9 83 65.1
Cc02_g37830 Coffea canephora HOM05D007870 ORTHO05D010015 8.7e-06 53.5 82 64.6
Manes.05G036400 Manihot esculenta HOM05D007870 ORTHO05D010015 8.7e-06 53.5 82 70.7
Potri.014G082300 Populus trichocarpa HOM05D007870 ORTHO05D010015 8.7e-06 53.5 83 80.7


User provided reference genes

Program Settings