Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.2e-136 489.2 289 100.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 1.6e-131 473.0 289 97.2
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 4.1e-58 229.2 255 61.2
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 5.9e-57 225.3 286 57.3
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 2.2e-56 223.4 270 56.3
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 2.9e-56 223.0 301 54.5
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 2.1e-54 216.9 285 49.5
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 3.7e-51 206.1 247 53.8
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.8e-50 203.8 258 56.2
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 3.5e-49 199.5 257 53.7
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 5.9e-49 198.7 286 52.4
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 7.7e-49 198.4 255 58.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 2.3e-48 196.8 288 47.6
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 2.9e-48 196.4 272 52.9
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 2.9e-48 196.4 260 55.8
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.9e-48 196.4 282 51.1
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 6.6e-48 195.3 262 51.9
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 8.6e-48 194.9 276 55.4
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 1.5e-47 194.1 247 46.6
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 1.5e-47 194.1 272 46.3
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.9e-47 193.7 277 51.3
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.5e-47 193.4 260 54.2
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 4.7e-46 189.1 271 53.5
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 4.7e-46 189.1 275 52.4
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 8.0e-46 188.3 292 53.8
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.0e-45 188.0 262 52.7
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.0e-45 188.0 260 53.5
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 3.0e-45 186.4 321 41.4
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 1.2e-44 184.5 292 50.0
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 4.4e-44 182.6 284 52.5
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.8e-43 179.9 296 41.6
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.8e-43 179.9 270 52.6
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 2.8e-43 179.9 265 46.8
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.1e-42 177.9 248 49.2
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.4e-42 177.6 272 47.8
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.4e-42 176.8 254 55.5
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 3.2e-42 176.4 247 51.8
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.1e-42 176.0 278 51.1
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 5.4e-42 175.6 272 52.9
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.2e-41 174.5 271 48.3
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 2.0e-41 173.7 317 42.0
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 2.0e-41 173.7 266 50.8
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.7e-41 173.3 294 48.3
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 5.9e-41 172.2 282 50.4
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.8e-41 171.8 291 48.8
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.7e-40 170.6 272 44.9
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 2.3e-40 170.2 273 51.3
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 2.9e-40 169.9 274 48.5
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 8.6e-40 168.3 271 49.4
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 8.6e-40 168.3 280 51.4
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.1e-39 167.9 244 50.8
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.1e-39 167.9 265 49.4
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 2.5e-39 166.8 274 44.9
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.0e-37 161.4 293 47.4
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.8e-37 160.6 283 39.6
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 8.9e-37 158.3 279 46.2
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.0e-36 157.1 281 47.7
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 2.0e-36 157.1 282 45.0
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.6e-36 156.8 371 40.2
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 4.4e-36 156.0 267 45.7
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.4e-36 156.0 276 50.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 7.5e-36 155.2 279 43.4
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.7e-35 154.1 250 47.6
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 2.2e-35 153.7 260 48.5
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-34 151.0 336 42.3
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.9e-34 150.6 294 42.2
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 1.9e-34 150.6 269 40.9
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 9.2e-34 148.3 252 45.6
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.7e-33 146.7 156 53.8
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 7.8e-33 145.2 301 37.9
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 1.3e-32 144.4 158 51.3
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 2.3e-32 143.7 275 38.2
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.0e-32 143.3 188 44.7
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 3.9e-32 142.9 254 46.9
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 3.3e-31 139.8 267 37.5
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 4.3e-31 139.4 267 44.9
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.2e-30 137.9 252 42.9
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 2.1e-30 137.1 264 45.5
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 2.8e-30 136.7 277 37.2
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 1.4e-29 134.4 305 36.1
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 3.1e-29 133.3 248 44.8
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.1e-29 133.3 321 34.9
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.2e-28 131.3 267 44.6
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.0e-28 130.6 295 42.4
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 3.4e-28 129.8 319 38.2
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 4.4e-28 129.4 330 33.6
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 5.8e-28 129.0 185 43.2
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 7.5e-28 128.6 272 41.9
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 4.9e-27 125.9 265 44.9
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 4.9e-27 125.9 265 44.9
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 6.4e-27 125.6 269 43.9
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.9e-26 124.0 176 44.9
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 2.4e-26 123.6 276 34.8
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 9.2e-26 121.7 197 56.9
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 5.1e-24 115.9 76 68.4
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.1e-23 114.8 278 39.9
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.9e-23 114.0 301 32.9
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.3e-23 113.2 278 39.9
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.1e-21 108.2 160 40.0
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 9.9e-20 101.7 58 72.4
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 4.3e-15 86.3 164 40.2
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.6e-15 85.1 299 28.8
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 2.4e-13 80.5 70 48.6
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 3.1e-13 80.1 55 61.8
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 2.0e-12 77.4 143 37.8
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 1.5e-07 61.2 135 28.9
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 7.3e-07 58.9 40 62.5
AUR62004167 Chenopodium quinoa HOM05D056854 ORTHO05D044030 7.3e-07 58.9 103 39.8
Eucgr.E01516 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.6e-06 57.8 68 54.4
Lj7P535T24 Lonicera japonica HOM05D007090 ORTHO05D008993 6.2e-06 55.8 89 48.3


User provided reference genes

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