Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 4.8e-56 221.9 163 100.0
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 3.0e-29 132.9 106 70.8
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.4e-10 70.1 101 43.6
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 5.2e-10 68.9 100 44.0
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.0e-09 67.0 107 45.8
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 3.4e-09 66.2 98 42.9
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 4.4e-09 65.9 102 43.1
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 5.8e-09 65.5 107 44.9
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.7e-08 63.9 97 40.2
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 2.2e-08 63.5 104 45.2
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.9e-08 63.2 94 41.5
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 2.9e-08 63.2 94 41.5
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 6.4e-08 62.0 104 42.3
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.4e-08 62.0 103 35.9
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.1e-07 61.2 113 38.9
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 1.9e-07 60.5 106 39.6
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.4e-07 60.1 102 38.2
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.2e-07 59.7 104 39.4
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.2e-07 59.7 102 38.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 9.3e-07 58.2 100 39.0
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.2e-06 57.8 104 38.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 1.6e-06 57.4 104 39.4
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 2.1e-06 57.0 123 35.0
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 2.1e-06 57.0 105 38.1
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.7e-06 56.6 122 32.8
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.5e-06 56.2 98 40.8
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 6.0e-06 55.5 104 40.4
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 6.0e-06 55.5 109 39.4
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.0e-06 55.5 104 39.4
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.0e-06 55.5 102 36.3
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.8e-06 55.1 108 38.0
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.8e-06 55.1 108 38.0
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 7.8e-06 55.1 105 41.0
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 7.8e-06 55.1 106 33.0


User provided reference genes

Program Settings