Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 1.8e-81 306.2 201 100.0
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 1.0e-76 290.4 194 99.5
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 8.8e-76 287.3 194 95.9
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.5e-70 270.0 220 78.2
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 5.1e-31 138.7 123 52.0
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.6e-31 138.3 163 46.6
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-30 136.3 164 45.7
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.6e-30 135.2 123 54.5
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 5.6e-30 135.2 121 52.1
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 2.8e-29 132.9 124 52.4
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-28 130.6 123 53.7
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 3.1e-28 129.4 122 51.6
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 5.2e-28 128.6 122 50.8
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.4e-27 125.9 122 50.0
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 4.4e-27 125.6 122 50.0
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-26 124.0 163 40.5
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.4e-25 120.6 121 47.1
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-25 120.6 123 48.0
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 5.4e-25 118.6 125 52.0
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 5.4e-25 118.6 125 52.0
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 5.4e-25 118.6 125 52.0
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 4.6e-24 115.5 109 49.5
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 7.8e-24 114.8 98 59.2
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-23 114.4 108 50.0
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-23 112.8 124 50.0
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-21 107.5 118 50.0
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.1e-21 106.7 138 44.9
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.8e-21 106.3 98 56.1
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 1.8e-20 103.6 98 54.1
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 6.9e-20 101.7 121 49.6
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.0e-20 101.3 98 51.0
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 1.2e-19 100.9 97 54.6
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-19 100.9 93 55.9
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.6e-19 99.8 112 46.4
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 3.4e-19 99.4 86 50.0
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-18 97.1 98 51.0
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 1.7e-18 97.1 115 43.5
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-17 94.0 90 52.2
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.9e-17 93.6 97 51.5
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 2.4e-17 93.2 98 50.0
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 2.4e-17 93.2 90 53.3
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.4e-17 93.2 87 52.9
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 9.3e-17 91.3 126 42.9
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.0e-16 88.6 125 36.8
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.0e-16 88.6 125 36.8
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 1.0e-15 87.8 108 40.7
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.9e-15 85.9 77 57.1
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.7e-15 84.7 133 39.8
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 2.5e-14 83.2 122 43.4
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 9.6e-14 81.3 125 32.8
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.6e-13 80.5 84 47.6
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.6e-13 79.3 93 45.2
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 4.8e-13 79.0 125 31.2
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 4.8e-13 79.0 125 31.2
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.8e-13 79.0 60 51.7
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 6.2e-13 78.6 125 31.2
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.1e-12 77.8 107 33.6
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 1.4e-12 77.4 125 30.4
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 1.5e-11 73.9 109 33.0
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.4e-11 72.8 77 50.6
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 5.8e-11 72.0 122 32.0
Aqoxy4G01036 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 7.6e-11 71.6 120 32.5
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 7.6e-11 71.6 113 29.2
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 1.3e-10 70.9 120 33.3
Lj2A19T41 Lonicera japonica HOM05D002907 ORTHO05D000065 1.7e-10 70.5 102 33.3
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 2.9e-10 69.7 125 28.0
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 2.9e-10 69.7 125 28.0
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.9e-10 68.9 71 49.3
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 4.9e-10 68.9 118 37.3
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 6.4e-10 68.6 67 50.7
DCAR_004276 Daucus carota HOM05D002907 ORTHO05D000065 6.4e-10 68.6 126 27.0
DCAR_000518 Daucus carota HOM05D002907 ORTHO05D000065 1.9e-09 67.0 123 29.3
DCAR_032054 Daucus carota HOM05D002907 ORTHO05D000065 2.4e-09 66.6 111 29.7
Aqoxy4G01560 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 4.2e-09 65.9 114 31.6
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 1.2e-08 64.3 97 33.0
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 1.2e-08 64.3 97 33.0
TWI39G0069 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 1.2e-08 64.3 106 29.2
Lj1A275T36 Lonicera japonica HOM05D002907 ORTHO05D000065 1.6e-08 63.9 107 30.8
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.6e-08 63.9 97 33.0
DCAR_001457 Daucus carota HOM05D002907 ORTHO05D000065 2.1e-08 63.5 110 27.3
HanXRQChr17g0543241 Helianthus annuus HOM05D009093 ORTHO05D010576 2.1e-08 63.5 112 29.5
DCAR_004801 Daucus carota HOM05D002907 ORTHO05D000065 3.5e-08 62.8 134 28.4
PSO063G1445 Papaver somniferum HOM05D021967 ORTHO05D005554 3.5e-08 62.8 120 30.0
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 3.5e-08 62.8 123 22.8
DCAR_011057 Daucus carota HOM05D002907 ORTHO05D000065 4.6e-08 62.4 110 28.2
DCAR_022753 Daucus carota HOM05D002907 ORTHO05D000065 4.6e-08 62.4 123 28.5
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 1.0e-07 61.2 117 28.2
ECA247G0482 Erigeron canadensis HOM05D009093 ORTHO05D010576 1.0e-07 61.2 111 24.3
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.3e-07 60.8 110 26.4
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 1.3e-07 60.8 110 28.2
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 1.8e-07 60.5 117 28.2
HanXRQChr08g0228831 Helianthus annuus HOM05D009093 ORTHO05D010576 1.8e-07 60.5 112 28.6
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.8e-07 60.5 109 24.8
ECA238G1002 Erigeron canadensis HOM05D009093 ORTHO05D010576 3.0e-07 59.7 111 27.0
DCAR_017346 Daucus carota HOM05D012849 ORTHO05D014614 5.1e-07 58.9 105 31.4
ECA236G0581 Erigeron canadensis HOM05D000004 ORTHO05D010576 5.1e-07 58.9 111 27.0
Aqoxy5G02850 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 6.7e-07 58.5 101 33.7
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 6.7e-07 58.5 109 25.7
Medtr5g057125 Medicago truncatula HOM05D000353 ORTHO05D002376 6.7e-07 58.5 108 33.3
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 8.7e-07 58.2 124 24.2
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 57.8 110 30.9
CARHR152820 Cardamine hirsuta HOM05D000305 ORTHO05D000065 1.1e-06 57.8 107 30.8
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 1.1e-06 57.8 110 24.5
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-06 57.4 114 24.6
Aa31LG7G11790 Aethionema arabicum HOM05D000353 ORTHO05D000174 1.9e-06 57.0 120 25.8
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-06 57.0 106 25.5
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 2.5e-06 56.6 110 25.5
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-06 56.2 120 26.7
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-06 56.2 120 26.7
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 3.3e-06 56.2 103 30.1
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 3.3e-06 56.2 103 30.1
DCAR_015915 Daucus carota HOM05D002907 ORTHO05D005554 4.3e-06 55.8 103 28.2
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 5.6e-06 55.5 121 28.1
Aqoxy7G01002 Aquilegia oxysepala HOM05D026627 ORTHO05D026736 5.6e-06 55.5 127 24.4
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-06 55.5 111 27.0
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-06 55.5 111 27.0
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 5.6e-06 55.5 96 25.0
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.6e-06 55.5 54 48.1
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-06 54.7 124 22.6
HanXRQChr10g0290091 Helianthus annuus HOM05D003964 ORTHO05D000174 9.6e-06 54.7 143 30.8


User provided reference genes

Program Settings