Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4186 Cannabis sativa HOM05D005871 ORTHO05D003654 2.9e-79 299.3 263 100.0
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 4.0e-20 102.8 262 39.7
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 5.8e-19 99.0 231 35.5
Cfa000051 Carpinus fangiana HOM05D005871 ORTHO05D003654 1.9e-17 94.0 90 61.1
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 3.2e-17 93.2 230 35.7
COL.COLO4_31921 Corchorus olitorius HOM05D005871 ORTHO05D003654 4.2e-17 92.8 233 49.4
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.6e-16 90.9 233 38.6
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 2.1e-16 90.5 236 35.2
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 2.1e-16 90.5 230 33.0
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 4.6e-16 89.4 68 64.7
Haze_07001 Corylus avellana HOM05D005871 ORTHO05D003654 2.3e-15 87.0 93 60.2
CiPaw.09G107300 Carya illinoinensis HOM05D005871 ORTHO05D003654 3.0e-15 86.7 88 58.0
Gohir.A06G155900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.0e-15 86.7 237 50.2
Lj6g0012820 Lotus japonicus HOM05D005871 ORTHO05D003654 5.1e-15 85.9 77 62.3
Glyma.09G012800 Glycine max HOM05D005871 ORTHO05D003654 4.3e-14 82.8 232 40.5
Manes.09G078218 Manihot esculenta HOM05D005871 ORTHO05D003654 1.6e-13 80.9 76 61.8
Ciclev10016570m.g Citrus clementina HOM05D005871 ORTHO05D003654 2.8e-13 80.1 106 52.8
Potri.016G007400 Populus trichocarpa HOM05D005871 ORTHO05D003654 2.8e-13 80.1 238 40.8
arahy.Tifrunner.gnm1.ann1.5G685G Arachis hypogaea HOM05D005871 ORTHO05D003654 1.1e-12 78.2 226 30.1
Manes.09G078209 Manihot esculenta HOM05D005871 ORTHO05D003654 3.1e-12 76.6 76 60.5
Sabra16G0012200 Salix brachista HOM05D005871 ORTHO05D003654 3.1e-12 76.6 94 48.9
Glyma.17G006900 Glycine max HOM05D005871 ORTHO05D003654 1.2e-11 74.7 228 29.8
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.9e-10 70.1 202 36.6
Eucgr.D01448 Eucalyptus grandis HOM05D005871 ORTHO05D003654 3.8e-10 69.7 46 73.9
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 1.1e-09 68.2 227 29.1
CsaV3_1G015540 Cucumis sativus L. HOM05D005871 ORTHO05D003654 1.9e-09 67.4 93 47.3
MD00G1057200 Malus domestica HOM05D005871 ORTHO05D003654 1.9e-09 67.4 228 30.3
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 1.9e-09 67.4 222 27.9
MELO3C026071.2 Cucumis melo HOM05D005871 ORTHO05D003654 5.5e-09 65.9 90 47.8
Cc09_g00530 Coffea canephora HOM05D005871 ORTHO05D003654 1.2e-08 64.7 237 33.8
PGR004G2708 Punica granatum HOM05D005871 ORTHO05D003654 1.2e-08 64.7 242 41.7
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.1e-08 63.9 103 39.8
Cpa.g.sc1092.4 Carica papaya HOM05D005871 ORTHO05D003654 2.7e-08 63.5 241 37.3
Sc05g0009780 Simmondsia chinensis HOM05D005871 ORTHO05D003654 2.7e-08 63.5 262 40.8
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 3.5e-08 63.2 259 25.1
Actinidia02292 Actinidia chinensis HOM05D005871 ORTHO05D003654 4.6e-08 62.8 268 30.6
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 6.0e-08 62.4 234 29.9
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 2.3e-07 60.5 249 34.1
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 2.3e-07 60.5 236 29.7
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 3.0e-07 60.1 234 28.6
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 6.7e-07 58.9 67 47.8
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 8.7e-07 58.5 86 40.7
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 8.7e-07 58.5 67 44.8
Atru.chr2.3672 Acer truncatum HOM05D005871 ORTHO05D003654 1.5e-06 57.8 103 34.0
Actinidia26837 Actinidia chinensis HOM05D001421 ORTHO05D001245 3.3e-06 56.6 105 41.0
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 4.3e-06 56.2 76 42.1
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 5.6e-06 55.8 88 37.5
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 7.4e-06 55.5 88 36.4
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 7.4e-06 55.5 78 43.6


User provided reference genes

Program Settings