Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.2e-110 403.3 212 100.0
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 5.8e-78 294.7 211 74.4
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.6e-78 294.3 212 73.6
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 9.9e-78 293.9 212 73.1
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.4e-77 290.8 212 72.2
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.9e-76 289.7 212 72.2
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.2e-75 287.0 212 73.1
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.2e-75 287.0 212 71.7
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 2.1e-75 286.2 211 69.2
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 5.1e-74 281.6 210 70.0
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 6.7e-74 281.2 210 69.5
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 6.7e-74 281.2 212 71.2
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.9e-73 279.6 213 69.5
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.9e-73 279.6 217 69.6
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.3e-73 278.5 213 70.4
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 5.6e-73 278.1 212 68.9
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 5.6e-73 278.1 210 71.0
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 5.6e-73 278.1 212 69.3
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 7.4e-73 277.7 219 68.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 1.6e-72 276.6 210 70.5
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 2.1e-72 276.2 210 69.5
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 4.8e-72 275.0 239 64.4
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 6.2e-72 274.6 212 69.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.4e-71 273.5 210 69.5
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 3.1e-71 272.3 212 67.9
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 5.3e-71 271.6 220 67.3
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.6e-70 269.2 212 65.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 4.5e-70 268.5 210 68.6
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 4.5e-70 268.5 210 69.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 2.2e-69 266.2 210 68.6
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 3.8e-69 265.4 216 67.1
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 8.4e-69 264.2 211 67.8
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 8.4e-69 264.2 207 66.7
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.5e-68 262.7 212 67.5
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 3.2e-68 262.3 211 65.4
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.5e-68 261.5 214 65.4
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 9.3e-68 260.8 217 65.4
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-67 260.0 212 66.5
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 2.7e-67 259.2 211 65.4
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 3.5e-67 258.8 215 66.0
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 4.6e-67 258.5 201 66.7
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 6.0e-67 258.1 216 63.9
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 6.0e-67 258.1 183 70.5
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 7.9e-67 257.7 226 63.7
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 7.9e-67 257.7 215 64.7
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.3e-66 256.9 221 62.4
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.3e-66 256.9 212 65.6
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.8e-66 256.5 214 63.1
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.8e-66 256.5 221 64.3
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 5.1e-66 255.0 219 63.0
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 8.7e-66 254.2 213 63.4
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 1.1e-65 253.8 190 68.9
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.5e-65 253.4 224 62.5
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.5e-65 253.4 234 62.0
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.5e-65 252.7 214 62.6
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 3.3e-65 252.3 214 62.1
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 3.3e-65 252.3 222 61.3
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 7.4e-65 251.1 213 63.8
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 7.4e-65 251.1 214 64.0
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-64 250.0 214 62.1
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 2.1e-64 249.6 221 62.4
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 3.7e-64 248.8 214 61.7
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.7e-64 248.8 190 67.4
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-63 247.3 160 78.8
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.8e-63 246.5 180 68.9
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 1.8e-63 246.5 195 66.7
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.4e-63 246.1 156 80.1
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 2.0e-62 243.0 209 64.6
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 2.6e-62 242.7 209 62.7
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.6e-62 242.7 209 62.7
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 3.4e-62 242.3 159 77.4
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.0e-61 240.7 212 63.2
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 2.2e-61 239.6 199 63.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 2.9e-61 239.2 202 63.9
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.4e-61 237.7 211 63.5
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.1e-60 237.3 212 63.2
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 2.1e-59 233.0 170 71.8
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.7e-59 232.6 219 62.6
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 2.7e-59 232.6 183 65.6
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 6.1e-59 231.5 289 50.2
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.3e-58 229.6 211 62.1
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.0e-58 229.2 157 75.2
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 1.9e-57 226.5 221 57.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 7.4e-57 224.6 152 75.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 1.4e-55 220.3 207 58.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.4e-55 220.3 160 67.5
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.8e-55 219.9 149 75.2
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 3.4e-54 215.7 217 57.6
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.5e-54 215.3 215 58.6
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.0e-53 214.2 154 70.1
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.2e-53 213.0 152 75.0
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.2e-52 209.1 151 68.9
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.6e-51 206.8 154 68.2
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 3.6e-51 205.7 166 65.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.7e-49 198.4 150 66.7
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.7e-48 196.8 156 62.2
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 8.2e-48 194.5 206 53.9
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.1e-44 184.1 147 61.9
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.4e-42 177.2 122 74.6
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.0e-42 176.0 184 54.9
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 5.5e-36 155.2 205 48.3
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 7.2e-36 154.8 172 49.4
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.4e-34 150.6 129 62.8
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.3e-34 149.8 161 57.1
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 6.3e-32 141.7 90 76.7
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.8e-31 140.2 175 48.0
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 7.0e-31 138.3 120 61.7
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.3e-29 134.0 181 46.4
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.2e-29 133.3 81 82.7
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 6.5e-29 131.7 79 83.5
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 3.7e-24 115.9 172 44.2
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.5e-20 103.2 72 72.2
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 4.2e-20 102.4 82 62.2
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 6.1e-19 98.6 74 68.9
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 5.2e-18 95.5 65 67.7
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 7.5e-17 91.7 240 30.0
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.5e-17 91.7 99 51.5
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 8.6e-13 78.2 61 68.9
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 1.5e-12 77.4 56 64.3
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 7.3e-12 75.1 85 54.1
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 4.7e-11 72.4 96 43.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 4.7e-11 72.4 66 54.5


User provided reference genes

Program Settings