Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 0.0e+00 1277.3 666 100.0
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.1e-146 524.6 685 50.2
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.5e-135 487.6 608 54.4
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 3.3e-135 486.5 590 55.4
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 2.8e-134 483.4 593 55.0
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 1.8e-133 480.7 734 47.5
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.2e-131 473.8 585 54.7
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.1e-130 471.5 598 53.0
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.9e-130 470.7 682 48.1
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 3.2e-130 469.9 721 45.8
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 6.6e-128 462.2 752 44.7
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 3.6e-118 429.9 690 45.5
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 1.8e-117 427.6 715 44.1
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 3.1e-117 426.8 681 45.7
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.6e-113 414.5 699 45.2
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 5.1e-112 409.5 698 42.8
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 5.6e-111 406.0 702 45.2
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 6.2e-110 402.5 704 45.0
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 8.1e-110 402.1 720 42.9
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 3.1e-109 400.2 709 44.3
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 5.3e-109 399.4 771 41.6
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 1.2e-108 398.3 704 42.5
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 1.5e-108 397.9 766 41.0
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 2.6e-108 397.1 714 42.0
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 2.2e-107 394.0 759 41.5
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 2.9e-107 393.7 755 41.6
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.8e-107 393.3 759 41.2
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 4.9e-107 392.9 682 44.3
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.1e-105 387.5 678 42.5
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.5e-100 371.3 695 41.3
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.1e-98 365.2 699 41.6
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 7.1e-98 362.5 645 41.7
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 2.1e-97 360.9 668 41.2
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 3.5e-97 360.1 627 42.4
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 6.0e-97 359.4 681 42.1
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 7.4e-95 352.4 724 39.6
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 9.7e-95 352.1 654 40.4
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.3e-94 349.4 716 39.8
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 5.3e-93 346.3 673 40.4
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 1.0e-91 342.0 663 40.7
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 2.5e-90 337.4 686 40.5
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 5.5e-90 336.3 766 37.7
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 3.9e-88 330.1 621 43.5
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.9e-87 327.8 720 38.2
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 4.3e-87 326.6 634 39.9
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 4.3e-87 326.6 684 40.2
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.2e-86 324.3 761 37.8
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.0e-83 315.5 827 34.6
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 2.9e-83 313.9 676 40.4
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 6.5e-83 312.8 652 39.7
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 7.2e-82 309.3 640 40.0
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 1.6e-81 308.1 624 39.9
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 6.1e-81 306.2 674 40.4
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 8.8e-80 302.4 613 38.3
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 2.6e-79 300.8 654 37.6
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 2.8e-78 297.4 707 37.5
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 8.2e-78 295.8 755 36.0
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.9e-74 284.6 651 36.7
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.2e-73 282.0 700 37.0
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 6.7e-72 276.2 635 40.0
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.5e-71 275.0 643 39.8
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 2.6e-71 274.2 682 38.4
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 5.7e-71 273.1 630 37.9
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 7.4e-71 272.7 627 39.4
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.0e-68 264.6 661 37.2
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 2.6e-68 264.2 300 57.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 3.5e-68 263.8 677 36.9
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 7.7e-68 262.7 481 44.5
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 7.7e-68 262.7 665 38.0
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 2.9e-67 260.8 667 38.7
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 3.2e-66 257.3 659 37.5
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 7.2e-66 256.1 642 36.0
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 7.2e-66 256.1 664 37.3
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.7e-65 254.2 657 37.0
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 8.0e-65 252.7 636 32.7
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 8.0e-65 252.7 534 39.9
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.6e-63 247.7 663 37.0
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.3e-62 245.4 608 37.7
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 2.7e-60 237.7 535 39.1
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 2.7e-60 237.7 676 35.4
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 8.0e-57 226.1 662 34.0
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 2.3e-56 224.6 661 33.3
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 3.0e-56 224.2 348 44.0
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 2.0e-55 221.5 682 32.1
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 2.0e-55 221.5 682 32.1
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 5.7e-55 219.9 679 32.0
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.3e-54 218.8 621 33.2
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 1.7e-54 218.4 677 32.9
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 3.7e-54 217.2 596 34.1
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 1.8e-53 214.9 629 35.0
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 4.5e-52 210.3 680 33.1
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 5.9e-52 209.9 686 32.9
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 7.7e-52 209.5 530 37.0
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 2.3e-51 208.0 623 32.7
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 5.0e-51 206.8 661 30.4
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 5.0e-51 206.8 667 31.6
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 1.1e-50 205.7 599 34.2
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.9e-50 204.9 582 34.9
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 9.5e-50 202.6 669 31.1
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 1.2e-49 202.2 534 36.1
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 4.7e-49 200.3 593 35.4
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 3.0e-48 197.6 504 36.5
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.5e-47 195.3 504 37.1
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 2.6e-47 194.5 590 35.1
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 5.4e-45 186.8 600 33.3
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.2e-44 185.7 610 33.4
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 1.6e-44 185.3 598 32.3
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 2.7e-44 184.5 610 33.4
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 3.8e-43 180.6 395 36.2
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 1.1e-42 179.1 609 32.5
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 2.1e-41 174.9 714 31.9
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.7e-38 165.2 319 42.3
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 6.8e-32 143.3 642 31.5
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 3.7e-30 137.5 639 30.7
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.5e-28 131.0 616 27.9
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 5.1e-27 127.1 622 28.0
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 2.3e-24 118.2 285 37.2
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 2.3e-24 118.2 285 37.5
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 6.8e-24 116.7 550 28.2
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 1.1e-21 109.4 590 28.8
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 9.2e-21 106.3 583 28.3
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 3.5e-20 104.4 294 36.4
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 1.1e-18 99.4 199 41.7
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 4.9e-14 84.0 165 41.8
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 1.9e-13 82.0 359 30.1
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 1.1e-10 72.8 427 27.2


User provided reference genes

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