Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 5.5e-202 707.6 402 100.0
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 1.4e-125 453.8 397 68.5
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 2.4e-125 453.0 397 66.5
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 6.6e-123 444.9 405 68.4
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.5e-122 443.7 407 65.6
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 2.1e-121 439.9 394 66.8
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 4.9e-118 428.7 401 64.1
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 1.4e-117 427.2 398 63.6
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 7.8e-116 421.4 402 64.4
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 1.7e-115 420.2 402 63.4
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 3.4e-111 406.0 407 61.7
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 4.4e-111 405.6 342 69.0
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 3.2e-109 399.4 401 61.8
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 7.8e-108 394.8 400 59.0
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 1.9e-106 390.2 404 63.1
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 5.6e-106 388.7 413 57.1
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 3.6e-105 386.0 411 61.8
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 1.8e-104 383.6 394 59.9
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 3.1e-104 382.9 398 58.3
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 4.0e-104 382.5 395 59.7
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 1.5e-103 380.6 337 65.6
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 1.4e-101 374.0 403 60.8
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 1.2e-100 370.9 402 59.7
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 1.6e-100 370.5 398 57.5
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 3.5e-100 369.4 402 58.0
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 7.9e-100 368.2 407 56.8
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.3e-99 367.5 405 56.8
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.8e-99 367.1 403 56.6
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.8e-99 367.1 402 60.9
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 3.0e-99 366.3 407 61.2
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 8.7e-99 364.8 405 55.6
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.3e-97 360.9 420 53.8
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 8.1e-97 358.2 395 56.7
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 5.3e-96 355.5 418 54.8
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 9.0e-96 354.8 398 60.6
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 3.8e-94 349.4 408 54.7
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 6.4e-94 348.6 411 56.7
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 5.5e-93 345.5 411 56.4
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 7.1e-93 345.1 407 54.1
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 1.6e-92 344.0 344 60.5
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 1.0e-91 341.3 410 54.1
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 1.8e-91 340.5 414 54.1
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 3.9e-91 339.3 409 54.5
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 5.1e-91 339.0 348 59.2
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 6.7e-91 338.6 414 53.9
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.5e-90 336.7 409 52.8
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.3e-89 334.3 367 56.4
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 2.8e-89 333.2 406 53.0
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.7e-89 332.8 349 58.2
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 4.8e-89 332.4 391 56.5
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 8.1e-89 331.6 367 56.1
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 8.1e-89 331.6 367 55.9
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 8.1e-89 331.6 349 58.2
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 3.1e-88 329.7 420 53.6
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 1.5e-87 327.4 349 60.5
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 1.5e-87 327.4 403 56.1
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 5.8e-87 325.5 403 53.6
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 5.8e-87 325.5 438 53.9
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 7.6e-87 325.1 437 53.3
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 2.2e-86 323.6 399 52.4
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 3.8e-86 322.8 411 52.6
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 3.5e-84 316.2 393 55.2
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 1.3e-83 314.3 396 54.8
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 1.3e-83 314.3 406 56.9
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 5.1e-83 312.4 396 52.8
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 6.7e-83 312.0 403 57.1
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 7.4e-82 308.5 422 49.1
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.4e-80 304.3 409 51.6
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 6.9e-80 302.0 400 50.5
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 6.9e-80 302.0 403 52.4
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 9.0e-80 301.6 408 49.0
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 7.6e-79 298.5 411 51.1
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 1.4e-77 294.3 395 53.4
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 2.7e-76 290.0 405 52.8
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 6.1e-76 288.9 405 52.6
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 2.3e-75 287.0 405 48.9
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 3.0e-75 286.6 404 48.0
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 3.0e-75 286.6 399 51.1
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 8.7e-75 285.0 434 46.8
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 3.3e-74 283.1 400 50.5
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 7.4e-74 282.0 336 53.9
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 9.7e-74 281.6 395 51.4
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 2.8e-73 280.0 302 62.3
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 2.8e-73 280.0 399 48.4
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 3.1e-72 276.6 405 49.4
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 9.1e-72 275.0 404 51.5
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-71 274.6 327 54.1
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 4.5e-71 272.7 400 50.8
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 1.7e-70 270.8 397 53.7
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 6.5e-70 268.9 342 52.6
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 2.7e-68 263.5 397 48.6
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 2.3e-67 260.4 420 49.8
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 3.0e-67 260.0 423 46.1
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 6.7e-67 258.8 345 50.4
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 1.5e-66 257.7 405 50.1
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 9.1e-64 248.4 415 44.6
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 2.0e-63 247.3 260 61.2
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 5.9e-63 245.7 331 48.6
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 2.5e-61 240.4 376 48.7
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.6e-60 237.7 403 45.4
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 6.7e-59 232.3 326 49.1
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 1.3e-57 228.0 372 47.3
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 4.8e-57 226.1 404 41.3
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 4.1e-56 223.0 384 45.3
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 4.1e-56 223.0 384 45.3
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 9.1e-56 221.9 384 44.8
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 9.1e-56 221.9 401 45.4
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 1.7e-54 217.6 383 44.9
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 1.7e-54 217.6 360 46.4
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 1.9e-53 214.2 391 45.3
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 5.5e-53 212.6 390 45.4
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 5.5e-53 212.6 276 51.4
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 5.5e-53 212.6 276 51.4
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 7.2e-53 212.2 390 44.9
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 9.4e-53 211.8 427 39.6
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 2.7e-52 210.3 394 45.2
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 1.0e-51 208.4 393 45.3
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 2.6e-50 203.8 288 52.4
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 2.6e-50 203.8 296 47.6
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 3.1e-48 196.8 191 58.6
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 5.7e-42 176.0 387 39.0
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 2.7e-39 167.2 398 35.9
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.9e-39 166.0 206 55.3
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.9e-39 166.0 206 55.3
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 5.9e-39 166.0 217 47.9
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.3e-35 154.1 208 51.9
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 6.8e-35 152.5 191 52.4
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 4.4e-34 149.8 243 46.5
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 1.3e-30 138.3 195 52.3
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 5.6e-29 132.9 297 38.4
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.1e-28 131.0 127 59.1
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 3.6e-28 130.2 399 32.8
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 6.1e-28 129.4 118 64.4
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.0e-27 126.7 205 46.3
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 8.9e-27 125.6 205 45.9
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-26 125.2 205 45.9
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 2.0e-26 124.4 402 33.8
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.4e-26 123.6 205 45.4
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 9.8e-26 122.1 205 44.9
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.3e-25 121.7 205 45.4
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 1.0e-22 112.1 86 70.9
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.3e-21 107.1 168 47.0
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 4.3e-21 106.7 392 34.7
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 7.3e-21 105.9 106 66.0
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 1.4e-16 91.7 149 43.6
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 2.3e-14 84.3 268 32.8
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 3.1e-11 73.9 61 70.5
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 6.8e-11 72.8 159 40.9
QL07p047840 Quercus lobata HOM05D004683 ORTHO05D005388 1.4e-08 65.1 55 65.5
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 7.1e-08 62.8 246 28.0
FvH4_3g38640 Fragaria vesca HOM05D037407 ORTHO05D035386 2.1e-07 61.2 79 51.9
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 2.1e-07 61.2 118 37.3
FvH4_3g16370 Fragaria vesca HOM05D037407 ORTHO05D035386 6.0e-07 59.7 73 50.7
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 2.3e-06 57.8 70 58.6


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