Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 2.7e-103 378.6 185 100.0
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 6.9e-67 257.7 185 69.2
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.2e-65 252.7 187 69.0
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.9e-65 252.3 187 69.0
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 8.4e-65 250.8 184 67.4
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.1e-64 250.4 187 68.4
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 2.4e-64 249.2 187 68.4
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 4.2e-64 248.4 184 69.0
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 5.5e-64 248.1 185 68.1
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 7.1e-64 247.7 184 67.4
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 9.3e-64 247.3 185 69.2
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 2.1e-63 246.1 185 69.7
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.5e-63 245.4 185 67.6
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.5e-63 245.4 185 67.6
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 4.6e-63 245.0 185 68.6
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 4.6e-63 245.0 184 67.9
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 6.0e-63 244.6 184 68.5
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 6.0e-63 244.6 184 68.5
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 6.0e-63 244.6 185 68.6
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 3.9e-62 241.9 184 66.3
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 5.1e-62 241.5 191 65.4
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 6.7e-62 241.1 186 66.7
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.5e-61 240.0 187 67.4
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 2.5e-61 239.2 184 69.0
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 5.6e-61 238.0 185 67.6
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.1e-60 236.1 185 62.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 2.1e-60 236.1 187 63.6
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.8e-60 235.7 184 65.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 4.8e-60 235.0 185 65.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.1e-59 233.8 184 62.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.1e-59 233.8 186 66.7
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.1e-59 233.8 184 65.8
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.5e-58 229.9 189 64.0
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.8e-57 225.3 185 62.7
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 8.4e-57 224.2 185 62.7
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 8.4e-57 224.2 185 62.7
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 3.2e-56 222.2 173 64.7
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 5.5e-56 221.5 186 62.9
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 5.5e-56 221.5 186 60.8
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 7.1e-56 221.1 185 64.3
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 7.1e-56 221.1 184 61.4
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.7e-55 219.2 186 61.3
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.7e-55 219.2 180 63.9
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 4.6e-55 218.4 185 60.5
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 6.0e-55 218.0 186 60.8
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 7.9e-55 217.6 185 60.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.3e-54 216.9 183 62.3
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.8e-54 216.5 185 62.7
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.3e-54 216.1 129 78.3
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 3.0e-54 215.7 150 70.7
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.9e-54 215.3 184 63.0
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 6.7e-54 214.5 185 61.1
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 6.7e-54 214.5 183 61.7
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.5e-53 213.4 139 72.7
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.5e-53 212.6 184 62.5
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 4.3e-53 211.8 182 63.7
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 5.7e-53 211.5 184 61.4
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 5.7e-53 211.5 187 59.9
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 7.4e-53 211.1 185 60.5
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 1.3e-52 210.3 185 61.6
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 1.6e-52 209.9 181 62.4
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 2.1e-52 209.5 187 58.3
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.1e-51 207.2 185 58.9
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.1e-51 207.2 185 60.0
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.1e-51 207.2 181 58.0
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.8e-51 206.5 185 58.4
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 3.1e-51 205.7 185 60.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 9.0e-51 204.1 195 56.9
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 2.0e-50 203.0 166 62.0
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 2.6e-50 202.6 185 58.9
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 3.4e-50 202.2 181 58.6
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 4.5e-50 201.8 185 61.1
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 4.5e-50 201.8 187 58.3
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 5.9e-50 201.4 186 58.1
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.3e-49 200.3 161 65.8
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.7e-49 199.9 157 66.9
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.7e-49 199.9 157 66.9
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 2.2e-49 199.5 160 65.6
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 2.2e-49 199.5 160 65.6
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 2.9e-49 199.1 128 74.2
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.9e-49 199.1 185 57.3
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 2.9e-49 199.1 189 56.1
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 3.8e-49 198.7 189 60.3
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 3.8e-49 198.7 128 74.2
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 5.0e-49 198.4 128 74.2
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 5.0e-49 198.4 161 64.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 5.0e-49 198.4 161 64.6
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 8.5e-49 197.6 167 64.7
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 8.5e-49 197.6 189 58.7
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.1e-48 197.2 118 75.4
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.9e-48 196.4 160 65.0
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 5.5e-48 194.9 139 68.3
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 9.3e-48 194.1 171 57.3
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.6e-47 193.4 148 66.2
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.9e-47 191.0 184 53.8
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 2.3e-46 189.5 111 79.3
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.1e-45 187.2 116 72.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 4.5e-42 175.3 188 54.3
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 1.0e-41 174.1 172 52.9
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 2.9e-41 172.6 152 58.6
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 4.6e-39 165.2 149 55.0
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 2.5e-32 142.9 126 58.7
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 7.2e-32 141.4 102 63.7
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 2.3e-30 136.3 150 53.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.4e-27 126.3 178 45.5
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 3.1e-27 125.9 118 55.1
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 2.1e-23 113.2 114 50.0
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 3.0e-22 109.4 97 51.5
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 1.3e-20 104.0 119 52.9
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 4.8e-20 102.1 162 40.7
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.6e-15 87.0 185 40.0
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 6.1e-15 85.1 103 46.6
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.3e-09 67.4 52 73.1


User provided reference genes

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