Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 2.7e-118 429.1 289 100.0
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 1.1e-34 151.4 270 49.6
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.9e-31 140.6 268 55.2
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.9e-31 140.6 268 55.2
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 7.3e-31 138.7 268 57.1
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.5e-31 138.3 268 54.9
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 9.5e-31 138.3 266 48.9
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 2.8e-30 136.7 287 47.0
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 4.7e-30 136.0 266 51.9
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 6.2e-30 135.6 268 47.8
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 3.1e-29 133.3 267 46.4
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.4e-28 129.8 266 49.2
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 3.4e-28 129.8 263 52.9
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 3.7e-27 126.3 272 56.6
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 4.9e-27 125.9 267 43.8
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 6.4e-27 125.6 269 45.4
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 6.4e-27 125.6 269 45.4
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 6.4e-27 125.6 269 45.4
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 6.4e-27 125.6 267 44.2
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 1.1e-26 124.8 271 44.6
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 1.4e-26 124.4 268 48.9
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.4e-26 124.4 267 46.1
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 3.2e-26 123.2 267 47.2
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 7.8e-25 118.6 271 50.9
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 1.3e-24 117.9 271 47.2
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.3e-24 117.9 282 43.3
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 6.6e-24 115.5 269 42.0
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 4.3e-23 112.8 269 44.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 9.5e-23 111.7 267 43.4
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 2.8e-22 110.2 270 54.4
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 2.8e-22 110.2 256 43.4
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 4.7e-22 109.4 260 43.5
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 8.1e-22 108.6 269 44.2
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 1.4e-21 107.8 276 48.9
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.4e-21 107.8 262 43.5
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 3.1e-21 106.7 99 64.6
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 3.1e-21 106.7 254 44.5
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 4.0e-21 106.3 264 46.2
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 8.9e-21 105.1 260 41.2
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 8.9e-21 105.1 265 44.9
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 2.0e-20 104.0 270 47.4
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 4.4e-20 102.8 276 47.1
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 7.6e-20 102.1 271 31.4
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 4.6e-17 92.8 272 38.6
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 1.0e-16 91.7 257 40.9
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 4.3e-15 86.3 285 32.3
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 5.6e-15 85.9 273 41.4
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 5.6e-15 85.9 272 29.0
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 7.3e-15 85.5 205 48.8
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.6e-14 84.3 96 51.0
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 3.6e-14 83.2 269 33.1
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.1e-13 81.6 267 35.6
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 2.4e-13 80.5 272 32.4
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 4.0e-13 79.7 242 36.0
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 8.9e-13 78.6 268 34.3
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 1.5e-12 77.8 263 41.4
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 2.0e-12 77.4 286 34.6
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 2.6e-12 77.0 269 32.3
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 5.8e-12 75.9 260 40.8
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 7.6e-12 75.5 283 35.3
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 1.7e-11 74.3 202 36.6
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 4.9e-11 72.8 201 42.8
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.4e-10 71.2 212 31.6
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 2.4e-10 70.5 232 37.5
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.4e-10 70.5 71 57.7
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 3.2e-10 70.1 277 32.5
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 3.2e-10 70.1 253 36.8
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 4.2e-10 69.7 232 37.1
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 4.2e-10 69.7 79 53.2
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 7.1e-10 68.9 93 48.4
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 1.2e-09 68.2 259 34.4
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 1.2e-09 68.2 60 65.0
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 1.2e-09 68.2 259 34.4
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 1.2e-09 68.2 259 34.4
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 1.2e-09 68.2 60 65.0
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.6e-09 67.8 66 56.1
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 2.1e-09 67.4 65 58.5
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 2.7e-09 67.0 249 36.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 3.5e-09 66.6 74 54.1
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 3.5e-09 66.6 74 54.1
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 3.5e-09 66.6 72 54.2
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 4.6e-09 66.2 283 34.3
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 4.6e-09 66.2 264 33.7
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 4.6e-09 66.2 69 59.4
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 6.0e-09 65.9 66 53.0
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.0e-08 65.1 71 52.1
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 1.3e-08 64.7 289 37.0
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 1.3e-08 64.7 267 33.3
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.3e-08 64.7 91 47.3
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 3.0e-08 63.5 72 51.4
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 3.0e-08 63.5 74 52.7
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 3.9e-08 63.2 262 37.8
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 5.1e-08 62.8 268 36.9
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 1.5e-07 61.2 74 54.1
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 1.9e-07 60.8 291 37.1
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 3.3e-07 60.1 240 30.0
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 1.3e-06 58.2 290 35.9
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 3.6e-06 56.6 262 29.4
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 4.8e-06 56.2 95 40.0
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 6.2e-06 55.8 264 27.7
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 8.1e-06 55.5 84 45.2
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 8.1e-06 55.5 98 39.8


User provided reference genes

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