Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 1.7e-100 369.4 196 100.0
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 3.6e-98 361.7 196 98.0
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 2.0e-80 302.8 192 81.2
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 1.6e-77 293.1 196 78.1
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 2.7e-77 292.4 194 77.8
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 3.5e-77 292.0 155 100.0
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.3e-76 290.0 192 77.1
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 3.0e-76 288.9 192 77.1
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.5e-75 286.6 192 76.6
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 1.5e-75 286.6 194 76.8
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 1.6e-74 283.1 192 74.5
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 1.6e-74 283.1 194 76.8
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 1.6e-74 283.1 192 76.6
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 2.1e-74 282.7 196 75.5
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.6e-74 282.0 193 74.6
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 4.7e-74 281.6 192 75.5
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 4.7e-74 281.6 196 76.0
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 6.2e-74 281.2 193 74.6
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 1.8e-73 279.6 192 74.5
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 2.3e-73 279.3 192 74.0
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 2.3e-73 279.3 196 75.5
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 4.0e-73 278.5 196 74.5
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.0e-72 276.2 196 73.5
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 5.8e-72 274.6 193 71.5
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 7.5e-72 274.2 192 74.0
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 9.8e-72 273.9 192 74.5
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 9.8e-72 273.9 192 74.0
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 9.8e-72 273.9 196 73.5
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 9.8e-72 273.9 196 73.5
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.2e-71 272.7 192 73.4
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.2e-71 272.7 192 73.4
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 3.7e-71 271.9 192 73.4
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 4.9e-71 271.6 192 70.8
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 4.9e-71 271.6 192 75.0
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 4.9e-71 271.6 192 75.0
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 8.3e-71 270.8 193 74.1
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 8.3e-71 270.8 192 72.9
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.1e-70 270.4 197 74.1
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.4e-70 270.0 195 71.3
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 2.4e-70 269.2 192 75.0
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 7.0e-70 267.7 192 69.8
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 7.0e-70 267.7 192 69.8
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 7.0e-70 267.7 192 69.8
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 7.0e-70 267.7 192 69.8
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 7.0e-70 267.7 192 69.8
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 1.2e-69 266.9 192 75.5
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.6e-69 266.5 196 70.9
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.1e-69 266.2 192 71.9
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 2.7e-69 265.8 192 72.4
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 3.5e-69 265.4 192 73.4
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 4.6e-69 265.0 192 69.3
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 6.0e-69 264.6 192 70.3
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 7.8e-69 264.2 192 69.8
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.0e-68 263.8 192 69.3
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.0e-68 263.8 192 71.9
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 2.3e-68 262.7 192 70.8
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 2.3e-68 262.7 193 72.5
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 3.9e-68 261.9 194 69.6
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 3.9e-68 261.9 192 71.4
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 6.6e-68 261.2 192 69.8
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 1.1e-67 260.4 193 72.5
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 1.1e-67 260.4 192 71.4
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.9e-67 259.6 192 68.2
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 3.3e-67 258.8 192 68.2
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 1.2e-66 256.9 194 69.1
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 1.8e-65 253.1 229 62.9
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 2.3e-65 252.7 243 60.5
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 3.1e-65 252.3 166 79.5
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 3.1e-65 252.3 192 69.8
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 4.0e-65 251.9 192 67.2
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 5.2e-65 251.5 176 73.9
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 6.8e-65 251.1 169 76.3
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 1.2e-64 250.4 189 67.2
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 2.0e-64 249.6 192 67.7
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 2.0e-64 249.6 192 66.7
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 3.4e-64 248.8 192 67.7
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 7.5e-64 247.7 196 65.3
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 9.9e-64 247.3 192 67.2
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 4.9e-63 245.0 193 66.8
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 6.4e-63 244.6 179 72.6
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 1.1e-62 243.8 191 64.9
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 3.2e-62 242.3 233 57.1
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 5.4e-62 241.5 193 65.3
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 9.2e-62 240.7 192 64.6
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 1.2e-61 240.4 192 64.1
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.6e-61 240.0 202 65.3
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.7e-61 239.2 192 64.6
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 6.0e-61 238.0 195 63.1
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 1.3e-60 236.9 200 61.5
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 2.3e-60 236.1 198 64.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 5.1e-60 235.0 173 68.2
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 6.6e-60 234.6 193 65.3
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 6.6e-60 234.6 193 65.3
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.9e-59 233.0 186 67.7
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 4.7e-58 228.4 192 64.1
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 2.4e-57 226.1 192 65.1
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 2.4e-57 226.1 194 63.4
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 5.2e-57 224.9 192 60.9
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.7e-55 219.9 192 58.9
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 2.2e-55 219.5 196 64.8
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 7.3e-51 204.5 178 64.0
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.6e-50 203.4 193 60.1
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 4.7e-50 201.8 138 79.7
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 7.1e-46 188.0 198 54.5
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 2.7e-45 186.0 166 60.2
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 7.8e-45 184.5 191 53.9
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 6.6e-44 181.4 192 49.5
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.1e-42 176.4 200 50.5
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 4.8e-42 175.3 194 49.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 2.0e-40 169.9 114 80.7
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.3e-39 167.2 200 52.0
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.8e-39 165.6 189 46.6
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 4.3e-35 152.1 130 64.6
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 9.6e-35 151.0 208 41.3
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 2.2e-31 139.8 180 44.4
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.1e-30 137.5 189 42.3
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.5e-30 136.3 188 42.6
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 6.0e-29 131.7 126 59.5
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-28 129.8 189 39.2
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 1.4e-25 120.6 114 64.0
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 4.5e-24 115.5 199 36.7
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 9.3e-22 107.8 157 40.1
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.9e-19 100.1 210 34.3
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 1.4e-17 94.0 51 90.2
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-17 93.6 135 40.0
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 1.5e-16 90.5 97 58.8
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.0e-16 90.1 197 28.4
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 7.7e-16 88.2 119 46.2
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 7.7e-16 88.2 118 48.3
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 2.9e-15 86.3 74 63.5
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 6.5e-15 85.1 65 64.6
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 1.9e-14 83.6 53 71.7
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.2e-13 80.9 126 40.5
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.0e-12 76.3 72 44.4
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 5.7e-11 72.0 51 66.7
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 7.4e-11 71.6 87 46.0
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 3.7e-10 69.3 53 56.6
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 5.9e-08 62.0 74 55.4
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 5.9e-08 62.0 48 66.7


User provided reference genes

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