Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 3.5e-285 984.2 459 100.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.3e-276 955.7 460 97.8
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.8e-254 882.1 459 88.5
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 7.0e-254 880.2 459 88.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.0e-253 878.6 459 88.5
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 6.6e-252 873.6 459 87.8
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.1e-251 872.8 459 87.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.1e-251 872.8 459 88.5
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 4.3e-251 870.9 459 88.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 9.5e-251 869.8 459 86.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.1e-250 868.6 459 88.5
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 4.7e-250 867.5 459 86.5
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 2.3e-249 865.1 460 88.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 5.2e-249 864.0 459 86.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.5e-248 862.4 459 86.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-248 862.1 459 87.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.0e-248 862.1 460 87.4
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.5e-248 860.1 460 87.4
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.3e-247 859.4 459 87.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.9e-247 858.2 459 86.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.7e-247 857.8 461 87.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.4e-246 855.9 459 85.4
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.4e-246 855.9 459 85.8
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-246 855.5 461 87.2
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 9.2e-246 853.2 459 87.4
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.6e-245 852.4 461 86.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.0e-245 852.0 461 86.6
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-245 851.7 461 87.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.7e-244 849.0 460 85.0
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.3e-244 848.6 459 84.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.3e-244 848.6 475 83.4
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.1e-243 846.3 459 85.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.9e-243 845.5 461 85.7
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 85.0
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.6e-242 841.3 459 84.5
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.3e-241 838.6 460 84.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.3e-241 838.6 460 84.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.3e-241 838.6 460 83.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.2e-241 837.4 481 82.1
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 6.8e-241 837.0 459 83.2
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 8.9e-241 836.6 460 84.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 5.8e-240 833.9 460 83.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.3e-239 832.8 459 85.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.4e-238 829.3 460 83.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.6e-237 825.9 459 84.1
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.5e-237 824.7 460 82.2
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.0e-236 823.2 460 81.7
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.0e-236 821.6 460 82.0
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.1e-234 815.5 459 81.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 3.6e-234 814.7 459 81.3
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 8.1e-234 813.5 459 81.0
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 8.1e-234 813.5 459 81.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.8e-233 812.4 461 81.3
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.3e-233 812.0 460 80.9
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 5.8e-232 807.4 460 80.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.7e-231 805.8 461 81.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.2e-231 805.4 459 82.8
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.6e-229 799.3 458 79.9
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.3e-228 796.2 462 78.1
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.3e-228 796.2 453 81.2
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.3e-228 795.4 459 81.9
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.3e-228 795.4 497 75.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 3.9e-228 794.7 459 79.5
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.1e-228 794.3 459 80.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 8.6e-228 793.5 459 79.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.1e-227 793.1 460 79.8
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.1e-227 793.1 459 81.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.5e-227 792.7 459 79.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.5e-227 792.7 459 79.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 2.8e-226 788.5 443 81.7
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.7e-226 787.7 460 78.5
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 6.8e-225 783.9 459 78.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 8.9e-225 783.5 459 78.6
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 4.4e-224 781.2 459 78.2
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.4e-224 781.2 458 78.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 9.9e-224 780.0 460 79.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.9e-223 777.7 460 79.3
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.4e-222 775.4 486 74.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.9e-215 751.9 460 77.6
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.4e-214 747.7 459 75.4
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.5e-211 738.8 458 73.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.3e-211 738.0 469 71.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-204 716.1 498 68.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.4e-200 701.8 459 71.7
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 7.9e-197 690.6 458 73.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.8e-186 654.8 454 65.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.5e-184 649.8 454 65.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.9e-184 647.9 393 76.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 6.5e-183 644.4 454 64.5
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.9e-182 642.9 341 88.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.9e-182 642.9 341 88.0
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.7e-178 628.6 340 86.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.6e-176 622.5 456 62.7
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.9e-176 621.3 338 86.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.9e-176 621.3 338 86.4
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-175 619.4 338 86.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.6e-173 612.1 385 77.9
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.7e-172 607.8 462 60.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 8.5e-167 590.9 321 86.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.1e-165 586.3 337 81.0
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.7e-162 576.6 338 81.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-162 575.9 304 88.2
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-159 567.0 461 56.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.8e-159 565.5 337 79.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-145 518.1 290 85.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.9e-144 515.0 300 81.0
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.3e-142 508.1 291 81.1
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 6.8e-140 501.5 337 72.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 6.4e-138 495.0 300 78.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 5.6e-134 481.9 269 80.7
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.6e-131 473.0 376 58.8
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.0e-127 459.5 280 77.1
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.8e-104 381.7 450 40.9
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 9.6e-94 348.2 484 37.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 9.0e-76 288.5 152 84.2
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-58 230.3 110 95.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-58 230.3 110 95.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-58 229.2 110 94.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.1e-52 211.8 195 55.4
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 5.2e-39 166.4 106 77.4
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-12 79.0 40 85.0


User provided reference genes

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