Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.3e-125 453.0 211 100.0
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 3.1e-87 325.5 211 71.1
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.5e-86 323.2 207 72.5
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.5e-86 323.2 211 70.6
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 9.9e-86 320.5 209 68.4
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 5.4e-84 314.7 207 68.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.1e-83 312.8 207 69.1
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 4.6e-83 311.6 207 68.1
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 7.8e-83 310.8 206 68.9
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.0e-82 310.5 207 68.1
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.7e-82 309.7 208 71.2
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 3.9e-82 308.5 207 70.5
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 6.6e-82 307.8 207 67.6
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 8.6e-82 307.4 207 66.7
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 4.3e-81 305.1 207 67.1
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.2e-80 303.5 214 66.8
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.6e-80 303.1 207 67.1
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.7e-80 301.6 207 66.2
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 4.7e-80 301.6 207 66.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 6.2e-80 301.2 206 65.0
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 3.1e-79 298.9 210 63.8
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.0e-79 298.5 214 65.9
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 5.2e-79 298.1 207 64.7
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 8.9e-79 297.4 207 66.7
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.6e-78 295.8 210 65.2
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.6e-78 295.8 207 65.2
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.4e-78 295.4 202 67.8
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 3.4e-78 295.4 206 66.0
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 4.4e-78 295.0 207 65.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 7.6e-78 294.3 207 68.1
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.2e-77 292.7 220 63.2
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.9e-77 292.4 207 64.3
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.9e-76 289.7 207 63.3
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 1.9e-76 289.7 207 64.3
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 1.9e-76 289.7 207 64.7
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 4.2e-76 288.5 209 61.7
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 4.2e-76 288.5 207 62.3
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 5.4e-76 288.1 207 67.1
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 7.1e-76 287.7 207 62.8
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 7.1e-76 287.7 204 64.2
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 9.3e-76 287.3 200 66.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.2e-75 287.0 207 63.3
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.2e-75 287.0 205 62.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.2e-75 287.0 206 63.1
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 1.6e-75 286.6 215 62.3
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 3.5e-75 285.4 207 62.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 4.6e-75 285.0 202 64.4
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 6.0e-75 284.6 206 63.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 7.8e-75 284.3 207 61.4
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 3.9e-74 282.0 207 61.8
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 6.6e-74 281.2 207 62.3
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 8.7e-74 280.8 214 62.1
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.5e-73 279.3 207 61.4
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.5e-73 279.3 206 61.7
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 3.3e-73 278.9 207 61.4
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 4.3e-73 278.5 193 65.3
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 7.3e-73 277.7 200 62.5
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.3e-72 276.9 208 59.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.1e-72 276.2 207 61.8
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.1e-72 276.2 200 61.5
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 4.8e-72 275.0 207 60.9
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 8.1e-72 274.2 215 59.5
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 2.4e-71 272.7 205 60.0
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.4e-71 272.7 231 57.1
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 3.1e-71 272.3 180 67.2
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 5.3e-71 271.6 209 60.3
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 6.9e-71 271.2 207 60.4
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.5e-70 270.0 243 53.1
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.0e-70 269.6 207 61.8
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.0e-70 269.6 185 64.3
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.6e-70 269.2 207 58.5
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 3.4e-70 268.9 207 59.4
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.4e-70 268.9 206 62.1
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.4e-70 268.9 207 59.9
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 4.4e-70 268.5 208 58.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 2.9e-69 265.8 207 58.5
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.1e-68 263.8 189 63.5
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.4e-68 263.5 208 59.1
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.4e-68 263.5 208 60.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 2.4e-68 262.7 207 59.9
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 4.6e-67 258.5 207 58.5
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 4.6e-67 258.5 207 56.5
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.3e-66 256.9 188 66.5
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 2.3e-66 256.1 206 57.3
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.1e-65 253.8 183 63.9
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 3.3e-65 252.3 302 45.4
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 5.6e-65 251.5 205 56.1
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 9.6e-65 250.8 189 58.7
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.1e-64 249.6 264 46.2
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.2e-62 243.8 208 56.2
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.6e-62 242.7 207 53.1
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.6e-62 242.7 202 59.9
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 2.2e-61 239.6 192 56.8
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 6.0e-59 231.5 237 48.5
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.9e-57 226.5 206 51.9
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 5.3e-55 218.4 175 57.7
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.2e-54 217.2 166 61.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.2e-53 213.0 164 61.6
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 6.5e-53 211.5 216 50.5
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.4e-47 193.7 212 48.1
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 3.1e-47 192.6 206 46.1
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 4.1e-47 192.2 156 57.7
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.3e-40 168.3 131 56.5
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.0e-37 161.0 269 34.9
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.3e-37 160.6 203 37.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.8e-37 159.1 186 40.3
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.0e-34 149.4 185 38.9
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.4e-31 140.6 138 51.4
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 1.3e-29 134.0 179 39.1
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 3.3e-25 119.4 91 60.4
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.2e-22 110.9 113 43.4
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.0e-22 110.2 92 58.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.1e-20 104.4 64 67.2
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 8.0e-19 98.2 58 69.0
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 4.1e-15 85.9 71 50.7
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 2.9e-13 79.7 94 44.7
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.0e-13 79.0 57 59.6
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 1.9e-12 77.0 122 36.1
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-09 66.6 80 48.8
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 4.5e-06 55.8 40 60.0
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 7.7e-06 55.1 65 50.8


User provided reference genes

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