Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3803 Cannabis sativa HOM05D009639 ORTHO05D010690 0.0e+00 1581.6 788 100.0
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 2.2e-53 214.9 798 29.4
Atru.chr12.1203 Acer truncatum HOM05D009639 ORTHO05D006184 4.6e-43 180.6 793 27.1
Haze_02948 Corylus avellana HOM05D009639 ORTHO05D010690 1.3e-34 152.5 864 25.7
Manes.11G010500 Manihot esculenta HOM05D009639 ORTHO05D010690 2.3e-34 151.8 806 25.2
Potri.003G188600 Populus trichocarpa HOM05D009639 ORTHO05D010690 2.8e-32 144.8 979 23.5
CiPaw.13G018700 Carya illinoinensis HOM05D009639 ORTHO05D010690 1.1e-31 142.9 519 28.7
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 5.8e-30 137.1 981 23.8
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 3.7e-29 134.4 782 26.6
Glyma.04G124900 Glycine max HOM05D009639 ORTHO05D010690 4.6e-27 127.5 821 24.2
Phvul.005G012500 Phaseolus vulgaris HOM05D009639 ORTHO05D010690 8.6e-26 123.2 876 24.9
Glyma.06G313400 Glycine max HOM05D009639 ORTHO05D010690 7.3e-25 120.2 820 24.1
Sabra03G0137900 Salix brachista HOM05D009639 ORTHO05D010690 2.1e-24 118.6 959 22.9
Psat4g150240 Pisum sativum HOM05D009639 ORTHO05D010690 1.5e-22 112.5 711 24.8
VMungo1080G0201 Vigna mungo HOM05D009639 ORTHO05D010690 2.6e-22 111.7 798 24.2
TPR.G24389 Trifolium pratense HOM05D009639 ORTHO05D010690 1.7e-21 109.0 716 25.0
Ciclev10002267m.g Citrus clementina HOM05D009639 ORTHO05D010690 4.6e-19 100.9 185 35.7
Medtr3g010860 Medicago truncatula HOM05D009639 ORTHO05D010690 1.3e-18 99.4 124 46.8
Lj3g0012055 Lotus japonicus HOM05D009639 ORTHO05D010690 1.7e-18 99.0 811 24.2
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 1.7e-18 99.0 129 46.5
Lalb_Chr18g0048201 Lupinus albus HOM05D009639 ORTHO05D010690 6.6e-18 97.1 808 23.8
Psat5g223640 Pisum sativum HOM05D009639 ORTHO05D010690 9.6e-17 93.2 122 44.3
Aqoxy1G01630 Aquilegia oxysepala HOM05D028564 ORTHO05D010690 6.9e-15 87.0 161 34.8
Aqoxy5G04141 Aquilegia oxysepala HOM05D009639 ORTHO05D010690 6.4e-13 80.5 103 42.7
Ca_25852_v3 Cicer arietinum L. HOM05D009639 ORTHO05D010690 2.7e-11 75.1 74 54.1
BcaC08g43056 Brassica carinata HOM05D010442 ORTHO05D010690 1.0e-10 73.2 129 41.1
C06p03150 Brassica napus HOM05D010442 ORTHO05D010690 1.0e-10 73.2 129 41.1
BolC6t35433H Brassica oleracea HOM05D010442 ORTHO05D010690 1.0e-10 73.2 129 41.1
Atru.chr12.1201 Acer truncatum HOM05D009639 ORTHO05D010690 2.3e-10 72.0 111 40.5
Sp1g35500 Schrenkiella parvula HOM05D010442 ORTHO05D010690 2.3e-10 72.0 134 37.3
AL1G55200 Arabidopsis lyrata HOM05D010442 ORTHO05D010690 6.6e-10 70.5 166 35.5
Carub.0001s3767 Capsella rubella HOM05D010442 ORTHO05D010690 1.5e-09 69.3 282 28.7
BraA06t23642Z Brassica rapa HOM05D010442 ORTHO05D010690 1.9e-09 68.9 123 41.5
AT1G48560 Arabidopsis thaliana HOM05D010442 ORTHO05D010690 4.3e-09 67.8 137 38.7
THA.LOC104809844 Tarenaya hassleriana HOM05D010442 ORTHO05D010690 4.8e-08 64.3 159 28.9
Aa31LG10G5240 Aethionema arabicum HOM05D010442 ORTHO05D010690 6.2e-08 63.9 139 36.7
BcaB07g33745 Brassica carinata HOM05D010442 ORTHO05D010690 6.2e-08 63.9 222 30.2
Thhalv10011299m.g Eutrema salsugineum HOM05D010442 ORTHO05D010690 1.4e-07 62.8 314 25.8
A06p04380 Brassica napus HOM05D010442 ORTHO05D010690 1.8e-07 62.4 242 30.6
MSTRG.27986 Avicennia marina HOM05D003060 ORTHO05D001716 3.1e-07 61.6 200 28.0
ATR1096G036 Amborella trichopoda HOM05D009639 ORTHO05D010690 9.0e-07 60.1 85 38.8
Lsat_1_v5_gn_9_87441 Lactuca sativa HOM05D003060 ORTHO05D001716 2.0e-06 58.9 198 27.8
Glyma.05G006200 Glycine max HOM05D000855 ORTHO05D001716 4.5e-06 57.8 69 40.6


User provided reference genes

Program Settings