Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 1.1e-50 203.0 97 100.0
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 1.1e-34 149.8 94 75.5
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 3.4e-33 144.8 89 76.4
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 5.8e-33 144.1 94 72.3
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 4.9e-32 141.0 95 69.5
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 2.4e-31 138.7 88 72.7
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 3.2e-31 138.3 93 69.9
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 4.2e-31 137.9 91 70.3
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 1.6e-30 136.0 89 70.8
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 1.0e-29 133.3 92 66.3
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 3.0e-29 131.7 88 68.2
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 3.0e-29 131.7 96 67.7
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 5.1e-29 131.0 96 66.7
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 6.7e-29 130.6 87 65.5
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 1.5e-28 129.4 89 65.2
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 1.5e-28 129.4 91 67.0
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 1.5e-28 129.4 94 66.0
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 1.9e-28 129.0 77 74.0
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 2.5e-28 128.6 89 68.5
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 2.5e-28 128.6 90 68.9
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 2.5e-28 128.6 96 65.6
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 3.3e-28 128.3 96 62.5
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 3.3e-28 128.3 89 67.4
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 3.3e-28 128.3 94 62.8
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 5.6e-28 127.5 79 74.7
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 5.6e-28 127.5 89 66.3
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 5.6e-28 127.5 89 66.3
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 7.4e-28 127.1 78 71.8
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 7.4e-28 127.1 78 71.8
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 7.4e-28 127.1 97 63.9
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 7.4e-28 127.1 96 64.6
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 9.6e-28 126.7 96 63.5
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 9.6e-28 126.7 88 63.6
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 1.3e-27 126.3 89 65.2
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 1.6e-27 125.9 95 65.3
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 2.8e-27 125.2 91 62.6
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 3.7e-27 124.8 89 64.0
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 3.7e-27 124.8 86 67.4
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 4.8e-27 124.4 84 69.0
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 6.2e-27 124.0 94 64.9
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 6.2e-27 124.0 84 65.5
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 6.2e-27 124.0 98 63.3
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 6.2e-27 124.0 83 66.3
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 8.1e-27 123.6 89 62.9
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 1.1e-26 123.2 87 66.7
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 1.1e-26 123.2 91 61.5
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.1e-26 123.2 89 62.9
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.4e-26 122.9 89 66.3
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 1.4e-26 122.9 86 67.4
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.8e-26 122.5 89 61.8
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 3.1e-26 121.7 91 67.0
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 4.0e-26 121.3 87 67.8
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 4.0e-26 121.3 84 70.2
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 5.3e-26 120.9 95 63.2
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 6.9e-26 120.6 91 60.4
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 9.0e-26 120.2 89 61.8
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 9.0e-26 120.2 89 66.3
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 9.0e-26 120.2 89 66.3
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.2e-25 119.8 84 69.0
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 1.2e-25 119.8 90 61.1
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 1.2e-25 119.8 92 65.2
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 2.6e-25 118.6 88 60.2
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 2.6e-25 118.6 88 60.2
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 2.6e-25 118.6 88 61.4
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 3.4e-25 118.2 86 64.0
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 4.5e-25 117.9 88 68.2
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 5.8e-25 117.5 91 64.8
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 7.6e-25 117.1 81 66.7
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 9.9e-25 116.7 97 58.8
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 9.9e-25 116.7 76 72.4
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 9.9e-25 116.7 92 64.1
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 1.7e-24 115.9 97 57.7
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.7e-24 115.9 89 62.9
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 1.7e-24 115.9 92 59.8
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 3.8e-24 114.8 79 68.4
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 3.8e-24 114.8 102 56.9
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 4.9e-24 114.4 76 71.1
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 6.4e-24 114.0 78 66.7
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 8.4e-24 113.6 75 68.0
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 8.4e-24 113.6 91 62.6
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 1.1e-23 113.2 76 69.7
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 2.4e-23 112.1 92 58.7
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 3.2e-23 111.7 76 67.1
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 4.2e-23 111.3 79 63.3
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.2e-23 111.3 99 56.6
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.2e-23 111.3 99 56.6
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 9.3e-23 110.2 89 62.9
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 9.3e-23 110.2 77 67.5
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 9.3e-23 110.2 88 58.0
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.2e-22 109.8 91 59.3
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 1.6e-22 109.4 82 64.6
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 2.1e-22 109.0 87 57.5
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 2.1e-22 109.0 90 57.8
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 2.7e-22 108.6 80 65.0
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.7e-22 108.6 91 57.1
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.7e-22 108.6 91 57.1
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 4.6e-22 107.8 64 76.6
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 4.6e-22 107.8 83 66.3
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 6.0e-22 107.5 90 56.7
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 7.9e-22 107.1 98 58.2
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 7.9e-22 107.1 92 53.3
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 1.0e-21 106.7 93 55.9
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 1.0e-21 106.7 83 62.7
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.0e-21 106.7 92 54.3
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.0e-21 106.7 92 54.3
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 1.8e-21 105.9 88 61.4
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 3.0e-21 105.1 88 55.7
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 3.9e-21 104.8 94 54.3
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 3.9e-21 104.8 70 67.1
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 3.9e-21 104.8 70 67.1
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 3.9e-21 104.8 80 60.0
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 5.1e-21 104.4 78 64.1
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 6.7e-21 104.0 70 67.1
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 6.7e-21 104.0 70 67.1
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 6.7e-21 104.0 64 71.9
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 6.7e-21 104.0 73 64.4
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 8.7e-21 103.6 64 71.9
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 1.9e-20 102.4 78 65.4
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 1.9e-20 102.4 79 62.0
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 2.5e-20 102.1 77 57.1
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 3.3e-20 101.7 82 54.9
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 3.3e-20 101.7 79 60.8
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 3.3e-20 101.7 72 63.9
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 4.3e-20 101.3 75 68.0
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 9.6e-20 100.1 80 60.0
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 1.3e-19 99.8 77 58.4
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 1.3e-19 99.8 77 58.4
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 3.7e-19 98.2 85 52.9
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.1e-18 96.7 76 61.8
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.4e-18 95.5 76 61.8
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 4.0e-18 94.7 98 51.0
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 2.0e-17 92.4 68 61.8
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 4.5e-17 91.3 76 56.6
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 8.4e-16 87.0 76 55.3
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 8.4e-16 87.0 76 55.3
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 8.4e-16 87.0 81 55.6
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 4.2e-15 84.7 93 44.1
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 9.3e-15 83.6 71 53.5
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.7e-14 82.0 65 60.0
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.7e-14 82.0 65 58.5
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 1.0e-13 80.1 80 46.2
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 1.3e-13 79.7 83 49.4
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.8e-13 79.3 56 60.7
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 3.0e-13 78.6 55 61.8
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 5.1e-13 77.8 63 54.0
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 5.1e-13 77.8 55 61.8
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 6.7e-13 77.4 61 57.4
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 6.7e-13 77.4 56 60.7
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 5.7e-12 74.3 75 49.3
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 2.2e-11 72.4 115 39.1
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 8.2e-11 70.5 56 55.4
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 1.1e-10 70.1 63 46.0
Gorai.013G138000 Gossypium raimondii HOM05D004571 ORTHO05D005334 1.2e-09 66.6 44 63.6
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 6.5e-08 60.8 69 39.1
TWI23G0269 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 8.5e-08 60.5 41 61.0


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