Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-129 466.5 215 100.0
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-117 426.0 215 90.7
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 7.4e-113 410.6 214 86.9
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 3.2e-100 368.6 185 91.9
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 8.5e-93 344.0 183 84.2
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 3.2e-92 342.0 183 83.6
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 5.0e-85 318.2 177 83.1
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-63 246.5 216 50.5
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-61 240.0 216 48.6
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-57 226.9 216 45.4
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 8.0e-51 204.5 211 44.5
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 6.2e-43 178.3 179 45.3
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-42 176.4 179 43.6
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-39 167.2 199 39.2
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-39 167.2 188 39.9
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 6.0e-38 161.8 211 35.1
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-35 152.5 212 34.0
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 6.8e-34 148.3 139 48.2
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 5.8e-33 145.2 211 32.2
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 5.8e-33 145.2 123 52.8
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-29 133.7 215 32.1
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-29 132.5 160 39.4
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 2.5e-28 129.8 100 59.0
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-28 129.4 215 31.2
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 9.6e-28 127.9 129 42.6
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-26 124.4 137 41.6
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 5.8e-25 118.6 135 41.5
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 7.1e-23 111.7 142 37.3
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-22 110.5 138 39.1
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-21 106.3 102 46.1
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-21 105.9 120 40.8
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 5.1e-21 105.5 102 46.1
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-20 104.0 115 40.9
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-20 103.6 102 44.1
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 2.5e-20 103.2 104 43.3
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 7.3e-20 101.7 115 40.0
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-19 100.9 186 28.0
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 2.1e-19 100.1 50 90.0
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-18 97.1 128 30.5
TWI38G1152 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-18 97.1 212 27.8
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.0e-18 95.9 212 27.4
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.0e-18 95.9 212 27.4
CANSAT78G1561 Cannabis sativa HOM05D008058 ORTHO05D010564 4.5e-17 92.4 132 37.1
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 3.8e-16 89.4 206 26.2
TWI77G0217 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.9e-16 89.0 212 26.9
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 8.4e-16 88.2 134 29.9
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-15 87.0 133 35.3
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 9.3e-15 84.7 82 40.2
TWI18G1213 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.9e-14 81.6 209 27.3
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-13 80.5 206 27.2
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-13 80.5 202 26.7
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-13 80.1 110 33.6
TWI32G1169 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-13 80.1 206 27.2
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.9e-13 79.3 206 26.7
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.9e-13 79.3 206 26.7
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.1e-13 79.0 203 26.1
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.1e-13 79.0 206 26.7
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.5e-12 77.4 206 26.2
CANSAT21G1032 Cannabis sativa HOM05D031271 ORTHO05D000397 1.3e-11 74.3 215 24.7
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.6e-11 73.9 200 26.0
Oeu043713.1 Olea europaea HOM05D000700 ORTHO05D000397 6.2e-11 72.0 169 27.2
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 8.1e-11 71.6 215 26.5
Oeu026953.1 Olea europaea HOM05D008641 ORTHO05D000397 1.1e-10 71.2 203 21.7
Aa31LG11G7310 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.4e-10 70.9 215 27.0
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-10 70.9 204 22.1
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-10 70.9 204 22.1
CANSAT56G0081 Cannabis sativa HOM05D031271 ORTHO05D000397 1.8e-10 70.5 216 24.5
Aa31LG7G10700 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.4e-10 70.1 163 30.1
CANSAT78G0252 Cannabis sativa HOM05D008058 ORTHO05D010564 2.4e-10 70.1 79 36.7
TWI14G0530 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-10 70.1 129 27.1
TWI23G1286 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-10 70.1 129 27.1
TWI38G0234 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-10 70.1 129 27.1
TWI53G1029 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.4e-10 70.1 129 27.1
CsaV3_2G012010 Cucumis sativus L. HOM05D010240 ORTHO05D011271 3.1e-10 69.7 194 25.3
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.1e-10 69.7 204 21.6
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.9e-10 68.6 139 29.5
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.0e-10 68.2 204 21.6
Aa31LG10G8940 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.6e-09 66.6 215 26.5
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 2.6e-09 66.6 143 29.4
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.6e-09 66.6 139 28.8
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 3.4e-09 66.2 178 24.7
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.5e-09 65.9 214 25.2
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.5e-09 65.9 197 25.9
TWI23G0222 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.6e-09 65.1 186 22.0
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.7e-08 63.9 219 26.5
Oeu006041.1 Olea europaea HOM05D008641 ORTHO05D000397 1.7e-08 63.9 203 19.7
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-08 63.5 147 24.5
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 2.2e-08 63.5 140 30.0
SGA_v2.0_scaffold9G04780 Striga asiatica HOM05D008585 ORTHO05D000397 2.2e-08 63.5 206 23.8
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 2.9e-08 63.2 205 24.4
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 4.9e-08 62.4 151 29.8
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 6.4e-08 62.0 143 25.9
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 8.4e-08 61.6 143 25.9
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 1.1e-07 61.2 151 29.1
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 1.1e-07 61.2 151 27.2
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-07 60.8 144 25.7
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 1.4e-07 60.8 210 23.3
Oeu058106.1 Olea europaea HOM05D008641 ORTHO05D000397 1.4e-07 60.8 124 28.2
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-07 60.8 206 23.8
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.9e-07 60.5 215 24.2
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 1.9e-07 60.5 151 29.8
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-07 60.1 143 23.8
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 2.4e-07 60.1 178 26.4
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.4e-07 60.1 213 21.6
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 2.4e-07 60.1 151 28.5
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 2.4e-07 60.1 152 30.9
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 3.2e-07 59.7 211 24.6
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 3.2e-07 59.7 188 26.6
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.2e-07 59.7 142 27.5
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.2e-07 59.3 210 21.9
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.2e-07 59.3 140 27.9
Oeu015787.1 Olea europaea HOM05D008641 ORTHO05D000397 4.2e-07 59.3 100 33.0
Oeu034355.1 Olea europaea HOM05D008641 ORTHO05D000397 4.2e-07 59.3 123 27.6
Oeu055861.1 Olea europaea HOM05D000700 ORTHO05D000397 4.2e-07 59.3 136 28.7
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 5.5e-07 58.9 147 21.1
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.5e-07 58.9 228 25.0
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 7.1e-07 58.5 128 27.3
Thhalv10029306m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.1e-07 58.5 148 27.7
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 7.1e-07 58.5 213 21.1
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 7.1e-07 58.5 198 23.2
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 9.3e-07 58.2 151 19.9
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 9.3e-07 58.2 188 26.1
Oeu026241.1 Olea europaea HOM05D008641 ORTHO05D000397 9.3e-07 58.2 90 31.1
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-06 57.8 211 23.2
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.2e-06 57.8 148 27.0
Oeu046709.1 Olea europaea HOM05D008641 ORTHO05D000397 1.2e-06 57.8 166 21.1
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 1.2e-06 57.8 206 23.3
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.6e-06 57.4 143 23.8
Thhalv10019524m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.6e-06 57.4 148 28.4
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.1e-06 57.0 145 24.8
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 2.1e-06 57.0 136 27.9
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 2.1e-06 57.0 147 20.4
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 2.1e-06 57.0 147 20.4
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-06 57.0 135 26.7
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 2.1e-06 57.0 139 24.5
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 2.1e-06 57.0 136 27.9
Thhalv10000549m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.1e-06 57.0 148 27.7
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.1e-06 57.0 214 22.0
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.1e-06 57.0 214 22.0
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-06 56.6 136 25.7
C06p17570 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-06 56.6 228 24.6
CANSAT35G0732 Cannabis sativa HOM05D031271 ORTHO05D010564 2.7e-06 56.6 163 25.2
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 2.7e-06 56.6 128 27.3
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-06 56.6 176 22.2
Thhalv10023182m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.5e-06 56.2 214 22.0
Thhalv10026990m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.6e-06 55.8 148 27.0
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-06 55.1 136 25.7
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.9e-06 55.1 214 21.5
Thhalv10019812m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.9e-06 55.1 215 22.3


User provided reference genes

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