Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 3.6e-288 994.2 490 100.0
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 6.0e-203 711.1 488 72.7
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 4.0e-199 698.4 487 73.1
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.0e-197 693.7 486 71.2
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.9e-197 692.2 486 70.4
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 6.5e-197 691.0 486 70.4
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.4e-197 690.6 490 70.0
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-196 690.3 487 70.0
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 5.5e-196 688.0 487 71.0
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 9.3e-196 687.2 483 70.4
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.0e-195 684.5 486 69.8
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 6.7e-194 681.0 488 70.7
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.1e-193 680.2 491 70.9
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 5.7e-193 677.9 488 69.5
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.3e-192 676.8 485 70.3
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 1.1e-191 673.7 486 70.0
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 1.4e-191 673.3 492 69.5
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.4e-191 673.3 491 69.7
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.4e-191 672.5 504 68.8
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 9.0e-191 670.6 484 68.0
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 9.0e-191 670.6 484 69.2
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.2e-190 670.2 489 69.5
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 4.5e-190 668.3 489 69.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 5.8e-190 667.9 484 68.8
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.4e-188 663.3 485 69.5
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 4.2e-188 661.8 450 72.2
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 7.1e-188 661.0 489 68.3
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 9.3e-188 660.6 489 67.7
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 4.6e-187 658.3 490 67.1
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 2.3e-186 656.0 486 68.1
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 2.3e-186 656.0 489 66.3
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 6.7e-186 654.4 489 67.5
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.1e-185 653.7 487 66.9
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 1.5e-185 653.3 488 66.6
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 3.3e-185 652.1 491 67.4
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 4.3e-185 651.7 503 66.4
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 5.7e-185 651.4 474 69.0
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 7.4e-185 651.0 490 67.3
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 1.3e-184 650.2 488 66.2
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.6e-184 649.8 495 66.7
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 2.8e-184 649.0 483 67.9
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 2.4e-183 646.0 478 67.2
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 3.1e-183 645.6 498 65.9
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 4.1e-183 645.2 487 65.7
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 9.0e-183 644.0 487 64.9
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 1.5e-182 643.3 486 66.5
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 1.5e-182 643.3 480 64.8
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.5e-182 643.3 485 66.2
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 4.5e-182 641.7 483 67.5
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 5.9e-182 641.3 485 67.0
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.0e-181 640.6 485 66.6
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.7e-181 639.8 487 64.9
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.2e-181 639.4 483 64.6
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.2e-181 639.4 483 64.6
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 3.8e-181 638.6 484 67.1
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 3.8e-181 638.6 485 65.8
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.1e-180 637.1 483 64.6
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.9e-180 636.3 485 65.8
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 2.5e-180 636.0 483 66.5
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.2e-180 635.6 436 70.9
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 3.2e-180 635.6 532 60.9
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 4.2e-180 635.2 485 66.2
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 5.5e-180 634.8 485 66.0
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 2.7e-179 632.5 486 66.3
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 2.7e-179 632.5 486 66.3
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 4.6e-179 631.7 485 65.8
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 6.1e-179 631.3 496 63.7
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 1.0e-178 630.6 492 63.6
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.4e-178 630.2 485 65.6
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.4e-178 630.2 482 67.4
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 6.7e-178 627.9 485 65.4
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.7e-177 624.0 434 70.7
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 4.8e-176 621.7 423 71.6
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 6.3e-176 621.3 489 61.3
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 6.3e-176 621.3 506 64.2
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 8.2e-176 620.9 478 64.2
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 5.9e-174 614.8 486 64.8
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.8e-173 612.1 489 61.8
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 1.9e-172 609.8 485 63.9
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 1.9e-172 609.8 486 64.2
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 2.7e-171 605.9 504 62.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 3.6e-171 605.5 484 63.8
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 6.7e-170 601.3 488 59.4
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 2.0e-169 599.7 491 63.1
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.6e-163 580.1 404 69.8
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 2.5e-156 556.2 444 63.1
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 5.9e-150 535.0 410 65.1
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 5.9e-150 535.0 448 58.0
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.7e-147 526.2 448 57.4
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.3e-144 517.3 504 57.1
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 3.7e-144 515.8 470 54.3
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 2.0e-134 483.4 351 69.8
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 6.2e-131 471.9 365 63.6
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 2.4e-127 459.9 477 54.1
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.5e-116 423.3 427 51.3
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.9e-111 407.1 434 49.5
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.2e-110 404.4 422 51.2
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 5.6e-108 395.6 430 47.9
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 6.2e-99 365.5 423 46.3
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 5.1e-93 345.9 429 42.7
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 5.3e-74 282.7 194 71.6
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.2e-63 246.5 195 61.0
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.2e-63 246.5 195 61.0
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 1.7e-56 224.6 213 55.4
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.3e-51 208.4 207 53.1
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 3.8e-24 117.1 88 68.2
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 5.4e-18 96.7 66 68.2


User provided reference genes

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