Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 6.4e-227 790.4 402 100.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.6e-148 530.0 398 68.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 3.8e-147 525.4 396 67.9
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 4.0e-144 515.4 399 68.4
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 5.2e-144 515.0 399 69.4
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 8.9e-144 514.2 399 69.4
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 3.7e-142 508.8 399 65.7
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 4.9e-142 508.4 408 66.7
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 4.6e-140 501.9 405 66.9
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.0e-139 500.7 404 65.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.7e-139 500.0 395 67.3
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 3.0e-139 499.2 395 67.1
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 3.0e-139 499.2 404 66.6
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.9e-139 498.8 390 65.9
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.1e-138 497.3 401 64.3
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.9e-138 496.5 389 65.8
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.9e-138 496.5 403 66.0
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.4e-136 490.3 397 64.5
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.1e-136 489.2 404 63.9
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.2e-136 488.4 387 64.9
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 9.8e-135 484.2 399 64.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.2e-134 483.0 394 64.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.6e-132 476.9 381 66.4
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.0e-132 476.5 407 60.4
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.8e-132 474.6 407 60.4
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 5.0e-131 471.9 409 62.6
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 4.3e-130 468.8 390 62.6
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.2e-127 460.7 412 61.2
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.0e-127 459.9 399 63.9
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.6e-127 459.5 402 61.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 7.5e-127 458.0 400 63.0
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.3e-126 457.2 404 60.9
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 2.9e-126 456.1 396 63.6
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 4.9e-126 455.3 397 62.7
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.1e-125 454.1 397 62.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 3.5e-124 449.1 404 60.9
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.3e-123 447.2 396 60.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.3e-123 447.2 397 61.2
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.7e-123 446.8 396 60.9
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 3.0e-123 446.0 400 59.8
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.9e-123 445.7 408 60.8
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 5.1e-123 445.3 419 58.5
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.5e-122 443.0 397 61.2
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 4.3e-122 442.2 397 58.9
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.6e-121 440.3 398 60.1
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 8.1e-121 438.0 408 59.6
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 8.1e-121 438.0 402 58.2
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.8e-120 436.8 399 59.9
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 2.3e-120 436.4 399 58.1
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 2.3e-120 436.4 405 61.2
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 4.0e-120 435.6 396 59.6
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 8.9e-120 434.5 403 60.3
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 4.4e-119 432.2 403 58.8
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 5.8e-119 431.8 412 57.8
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 7.6e-119 431.4 396 58.8
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 9.9e-119 431.0 407 57.7
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 6.4e-118 428.3 379 63.3
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.4e-117 427.2 397 59.4
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.6e-116 423.7 404 57.4
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.7e-116 422.9 396 58.6
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 3.5e-116 422.5 406 54.7
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 3.0e-115 419.5 385 59.7
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 3.0e-115 419.5 377 57.6
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 5.1e-115 418.7 314 67.8
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 8.6e-115 417.9 396 58.6
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 8.6e-115 417.9 396 58.6
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 8.6e-115 417.9 396 58.6
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-114 417.2 396 58.6
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.9e-114 416.8 289 69.6
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 3.3e-114 416.0 396 58.6
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.6e-113 413.7 414 56.5
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.8e-113 412.9 317 62.8
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 8.1e-113 411.4 411 54.0
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 1.8e-112 410.2 396 56.6
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 4.0e-112 409.1 400 54.2
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 7.6e-111 404.8 273 71.8
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.4e-110 401.7 407 56.8
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 8.4e-110 401.4 380 55.8
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 9.3e-109 397.9 395 56.2
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.5e-108 396.0 407 56.3
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 3.9e-107 392.5 405 54.8
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 7.3e-106 388.3 306 63.7
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.8e-104 383.6 322 64.0
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 3.1e-104 382.9 246 74.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 2.9e-102 376.3 251 73.7
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.9e-101 373.6 357 59.9
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 2.7e-100 369.8 394 52.5
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.5e-98 364.0 342 55.6
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.3e-97 360.9 339 57.2
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 4.8e-97 359.0 409 49.4
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 9.0e-96 354.8 307 57.7
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 2.2e-94 350.1 393 50.4
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 3.9e-91 339.3 216 77.8
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 3.3e-90 336.3 399 50.4
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 2.2e-86 323.6 301 58.8
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 2.5e-74 283.5 399 44.6
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.8e-70 269.6 402 43.5
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 1.4e-59 234.6 151 72.2
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.1e-52 210.7 309 37.5
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 3.1e-48 196.8 290 36.2
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.7e-44 183.7 142 64.8
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.7e-44 183.7 142 64.8
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.7e-44 183.7 242 50.4
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 2.6e-42 177.2 269 38.3
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.6e-42 177.2 117 75.2
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 7.5e-42 175.6 270 37.4
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 3.1e-40 170.2 215 49.8
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 5.7e-34 149.4 200 47.5
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 9.2e-32 142.1 158 50.6
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 7.8e-31 139.0 97 73.2
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.0e-26 124.4 187 43.9
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.1e-24 118.6 248 33.1
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.0e-14 85.5 292 28.1
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 2.6e-10 70.9 215 27.4
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 7.5e-10 69.3 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 2.9e-09 67.4 92 45.7


User provided reference genes

Program Settings