Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 1.3e-137 493.0 247 100.0
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.7e-127 458.8 245 93.1
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 91.4
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 3.0e-126 455.3 245 93.5
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 6.7e-126 454.1 245 91.4
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 8.7e-126 453.8 245 91.4
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.1e-125 453.4 245 92.7
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.1e-125 453.4 245 92.7
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.1e-125 453.4 245 91.4
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.5e-125 453.0 245 91.0
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.9
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 3.3e-125 451.8 245 92.2
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 3.3e-125 451.8 247 91.1
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 4.3e-125 451.4 247 91.5
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 91.8
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 91.8
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 91.0
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 5.7e-125 451.1 245 91.8
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.8
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.4
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.8
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 92.2
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.8
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 91.5
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 1.6e-124 449.5 245 91.0
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 2.2e-124 449.1 244 91.8
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 91.5
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.2e-124 449.1 245 91.0
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 90.3
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 92.2
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 90.2
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 2.8e-124 448.7 247 90.7
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 90.6
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 91.1
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 8.2e-124 447.2 248 91.1
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 8.2e-124 447.2 248 91.1
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 91.1
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 91.1
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 90.2
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 90.2
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 90.2
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 90.2
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 90.7
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 89.4
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 89.9
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 1.1e-123 446.8 247 90.3
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 1.1e-123 446.8 243 90.1
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 1.1e-123 446.8 245 91.0
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 90.7
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 90.7
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 90.7
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 1.4e-123 446.4 245 90.6
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 90.3
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.8e-123 446.0 246 90.7
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.8e-123 446.0 252 90.1
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 89.8
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 91.1
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 3.1e-123 445.3 245 89.8
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.1e-123 445.3 245 91.4
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 3.1e-123 445.3 246 90.2
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 3.1e-123 445.3 246 90.2
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 90.3
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 4.1e-123 444.9 244 91.4
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 4.1e-123 444.9 244 89.8
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 89.0
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 91.8
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 90.6
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 5.3e-123 444.5 245 90.6
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 6.9e-123 444.1 245 91.8
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 9.0e-123 443.7 247 89.5
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 9.0e-123 443.7 245 90.2
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 9.0e-123 443.7 247 89.9
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 1.2e-122 443.4 244 90.6
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 89.0
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.5e-122 443.0 243 89.3
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.0
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 89.5
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 89.5
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 89.5
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 89.1
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 2.0e-122 442.6 246 89.8
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.4
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.4
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.1
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.5
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.5
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.4e-122 441.8 246 89.4
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 87.9
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 5.9e-122 441.0 247 89.1
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 7.7e-122 440.7 247 89.5
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 88.6
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 89.0
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 88.2
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 1.7e-121 439.5 246 90.2
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.7e-121 439.5 247 89.1
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 2.2e-121 439.1 269 85.1
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 88.6
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 5.0e-121 438.0 243 88.5
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 89.4
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.6
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.2
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 1.1e-120 436.8 243 88.1
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 1.9e-120 436.0 246 88.6
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 4.2e-120 434.9 246 89.4
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 87.8
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 7.2e-120 434.1 248 88.3
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 7.2e-120 434.1 248 87.9
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 87.8
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 9.4e-120 433.7 245 87.8
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 86.9
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 3.6e-119 431.8 245 86.1
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 4.6e-119 431.4 284 80.6
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 7.9e-119 430.6 245 86.9
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 5.1e-118 427.9 246 87.0
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 8.8e-118 427.2 290 76.9
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 2.2e-116 422.5 235 89.4
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.1e-115 420.2 246 85.4
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.1e-115 420.2 247 85.8
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.8e-115 419.5 304 73.0
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 1.8e-115 419.5 246 85.8
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 1.8e-115 419.5 260 81.9
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 4.1e-115 418.3 246 85.8
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 5.3e-115 417.9 246 85.4
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 2.5e-112 409.1 332 67.2
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 1.6e-111 406.4 249 82.3
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 6.7e-110 401.0 214 93.5
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 1.5e-109 399.8 245 82.0
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 5.7e-109 397.9 251 79.7
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 9.7e-109 397.1 251 79.3
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 4.8e-108 394.8 249 79.5
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.6e-106 389.0 251 77.3
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.6e-106 389.0 251 77.3
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.7e-105 386.3 209 90.4
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.7e-105 386.3 209 90.4
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.9e-104 382.9 264 76.5
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 5.2e-102 374.8 359 59.6
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 1.5e-101 373.2 213 87.8
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 7.0e-91 337.8 245 72.2
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 1.0e-89 334.0 198 88.4
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.2e-85 320.5 245 69.8
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.5e-85 320.1 245 71.0
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 6.6e-81 304.7 172 89.5
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.5e-80 303.5 172 89.5
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 4.2e-80 302.0 179 86.0
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 1.2e-79 300.4 166 88.0
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.0e-78 297.4 163 89.0
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.6e-71 273.5 278 54.7
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 8.9e-62 241.1 241 49.4
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 5.4e-59 231.9 138 83.3
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.6e-49 198.4 245 52.7
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 4.3e-48 195.7 232 44.4
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 1.7e-44 183.7 102 88.2
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 1.9e-43 180.3 250 42.8
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.5e-40 170.6 94 87.2
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 8.1e-39 164.9 208 51.0
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 2.7e-34 149.8 163 53.4
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 2.1e-31 140.2 141 56.0
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 1.3e-28 131.0 82 80.5
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 6.4e-28 128.6 83 78.3
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 5.5e-27 125.6 84 73.8
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.1e-26 123.6 82 79.3
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 2.5e-24 116.7 215 41.9
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 2.5e-24 116.7 232 36.2
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 4.2e-19 99.4 99 48.5
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 6.7e-17 92.0 51 84.3
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.9e-16 90.5 53 86.8
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 1.3e-15 87.8 74 66.2
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 4.8e-15 85.9 47 78.7
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.4e-14 84.3 51 82.4
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 6.9e-14 82.0 52 84.6
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 2.0e-13 80.5 79 60.8
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.3e-11 71.6 38 86.8
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.6e-10 70.9 90 52.2
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 1.6e-10 70.9 106 49.1
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.3e-09 67.0 44 81.8
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.2e-07 60.5 98 45.9
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 4.8e-07 59.3 90 50.0
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 9.0e-06 55.1 36 66.7
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 9.0e-06 55.1 36 66.7
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 9.0e-06 55.1 36 66.7


User provided reference genes

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