Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 6.5e-254 880.2 426 100.0
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 3.4e-218 761.5 426 84.3
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.6e-212 742.7 426 82.4
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.6e-212 742.7 426 79.6
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.8e-211 739.2 423 82.0
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 6.8e-211 737.3 421 82.7
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 9.9e-210 733.4 426 78.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 9.9e-210 733.4 426 78.9
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 9.9e-210 733.4 426 79.3
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.3e-209 733.0 426 79.3
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.7e-209 732.6 425 80.2
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 2.9e-209 731.9 409 82.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.7e-209 731.5 426 78.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.6e-207 726.1 412 82.8
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.7e-207 725.3 426 78.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.0e-207 724.2 426 79.8
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 1.7e-206 722.6 426 77.0
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 2.3e-206 722.2 414 79.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.1e-206 721.1 427 78.0
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 6.6e-206 720.7 427 77.8
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.1e-205 719.9 427 78.2
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.5e-205 718.8 413 80.1
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 7.3e-205 717.2 429 76.5
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 9.5e-205 716.8 421 80.0
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.2e-204 714.1 426 80.0
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.6e-202 708.8 427 75.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 5.8e-202 707.6 424 80.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 5.8e-202 707.6 426 76.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 3.8e-201 704.9 426 76.3
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 6.4e-201 704.1 426 76.1
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 6.4e-201 704.1 426 74.9
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 8.4e-201 703.7 414 78.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.4e-200 702.2 421 76.5
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 9.2e-200 700.3 426 74.9
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 9.2e-200 700.3 427 76.3
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 9.2e-200 700.3 414 76.3
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.2e-199 699.9 426 75.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.6e-199 699.5 426 75.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 6.0e-199 697.6 421 76.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 6.0e-199 697.6 423 76.4
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.0e-198 696.8 426 75.4
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 3.0e-198 695.3 427 74.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 5.1e-198 694.5 426 75.4
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 5.1e-198 694.5 426 75.4
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 6.6e-198 694.1 427 73.1
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.1e-197 693.3 426 75.1
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.9e-197 692.6 426 75.1
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.9e-197 692.6 426 74.9
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.5e-197 692.2 426 75.1
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 7.3e-197 690.6 426 72.5
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 7.3e-197 690.6 426 72.3
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 9.6e-197 690.3 426 75.8
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 9.6e-197 690.3 421 75.3
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.6e-196 689.5 427 73.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.8e-196 688.7 426 74.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.8e-196 688.7 421 78.4
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 4.7e-196 688.0 427 74.2
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 6.2e-196 687.6 415 76.6
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 9.9e-194 680.2 426 73.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.4e-193 677.6 412 78.6
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 6.4e-193 677.6 426 74.2
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.4e-192 675.6 452 69.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 6.0e-191 671.0 426 72.1
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.0e-190 670.2 427 74.0
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 2.3e-190 669.1 426 71.4
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 3.0e-190 668.7 427 73.3
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.9e-190 668.3 404 76.7
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 6.6e-190 667.5 426 72.3
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.5e-189 666.4 426 70.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.6e-188 661.8 414 72.5
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 3.6e-188 661.8 540 61.5
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 4.8e-188 661.4 427 71.9
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 3.1e-187 658.7 427 72.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.4e-184 649.8 426 69.2
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 5.4e-184 647.9 398 73.4
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 3.0e-182 642.1 426 68.5
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.0e-182 642.1 420 69.8
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 5.1e-182 641.3 414 71.3
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.3e-181 638.3 469 65.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.7e-180 635.2 437 68.2
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 2.1e-175 619.4 411 69.1
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 3.9e-174 615.1 417 70.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.1e-171 605.5 458 65.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 2.5e-168 595.9 425 66.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.8e-166 589.7 424 63.0
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.9e-160 569.7 388 69.1
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 5.1e-158 561.6 425 63.5
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 7.4e-157 557.8 416 64.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 4.7e-151 538.5 366 69.7
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.8e-150 536.6 386 65.0
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 4.8e-148 528.5 389 68.1
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 9.1e-147 524.2 316 76.3
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 4.5e-146 521.9 315 74.6
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 7.4e-141 504.6 426 61.7
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.1e-99 367.9 214 78.0
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.1e-91 341.3 345 45.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 3.0e-89 333.2 206 74.8
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.5e-88 330.1 207 72.9
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.9e-84 316.6 348 44.8
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.9e-83 313.9 347 42.7
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.0e-73 280.0 368 36.1
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.1e-64 251.5 281 42.3
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 6.5e-44 182.6 106 74.5
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 9.7e-40 168.7 103 71.8
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.1e-38 165.2 85 85.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 9.1e-38 162.2 106 68.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 9.1e-38 162.2 106 68.9
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 4.5e-37 159.8 103 68.9
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 6.3e-31 139.4 141 55.3
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.8e-15 86.7 49 75.5
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.1e-14 84.0 49 73.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.4e-14 83.2 50 70.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.5e-11 74.3 48 66.7
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 2.1e-10 71.2 45 71.1
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.8e-09 68.2 63 49.2
FAN21G2570 Fragaria x ananassa HOM05D011847 ORTHO05D013847 7.0e-06 56.2 36 66.7


User provided reference genes

Program Settings